RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 OTOP3Q7RTS5 596 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 CCDC185Q8N715 623 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 BANPQ8N9N5 519 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 PIK3C3Q8NEB9 887 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 PNPT1Q8TCS8 783 aaKnown RBP13.06□□□□□ -0.32
TNC-212ENST00000542877 STYXQ8WUJ0 223 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 LPPQ93052 612 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 TSSK3Q96PN8 268 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 LMAN2LQ9H0V9 348 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 ASAH2Q9NR71 780 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 NUDT4Q9NZJ9 180 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 OR10H1Q9Y4A9 318 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 PCDHGA4Q9Y5G9 962 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 LRRC14BA6NHZ5 514 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 SLC22A2O15244 555 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 IFNA16P05015 189 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 MANFP55145 182 aaKnown RBP13.06□□□□□ -0.32
TNC-212ENST00000542877 TAS2R41P59536 307 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 SMAD3P84022 425 aaKnown RBP13.06□□□□□ -0.32
TNC-212ENST00000542877 LCP2Q13094 533 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 IL18R1Q13478 541 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 ITGA7Q13683 1181 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 ALG11Q2TAA5 492 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 USP41Q3LFD5 358 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 VWA5B1Q5TIE3 1220 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 CHSY3Q70JA7 882 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 CBR4Q8N4T8 237 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 IRGQQ8WZA9 623 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 SKA1Q96BD8 255 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 CXorf40BQ96DE9 158 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 AARSD1Q9BTE6 412 aaKnown RBP13.06□□□□□ -0.32
TNC-212ENST00000542877 ABCG8Q9H221 673 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 ALG2Q9H553 416 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 C3orf14Q9HBI5 128 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 GRHL1Q9NZI5 618 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 ZNF510Q9Y2H8 683 aa13.06□□□□□ -0.32
TNC-212ENST00000542877 OR10H2O60403 315 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 IFNGP01579 166 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 GJB1P08034 283 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 FECHP22830 423 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 CDH5P33151 784 aaPredicted RBP13.05□□□□□ -0.32
TNC-212ENST00000542877 PTPN5P54829 565 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 NRG1Q02297 640 aaPredicted RBP13.05□□□□□ -0.32
TNC-212ENST00000542877 GPR158Q5T848 1215 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 OLFML1Q6UWY5 402 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 CERS6Q6ZMG9 384 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 FAM84AQ96KN4 292 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 SLC9A7Q96T83 725 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 DNAJC11Q9NVH1 559 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 TRPS1Q9UHF7 1281 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 ZNF780BQ9Y6R6 833 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 NDST3O95803 873 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 ANGPTL1O95841 491 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 SMARCB1Q12824 385 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 FSTL1Q12841 308 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 SIM2Q14190 667 aaPredicted RBP13.05□□□□□ -0.32
TNC-212ENST00000542877 CYP1B1Q16678 543 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 CAPN13Q6MZZ7 669 aaPredicted RBP13.05□□□□□ -0.32
TNC-212ENST00000542877 RALGPS2Q86X27 583 aaPredicted RBP13.05□□□□□ -0.32
TNC-212ENST00000542877 OR4K2Q8NGD2 314 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 C1GALT1C1Q96EU7 318 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 C12orf65Q9H3J6 166 aaKnown RBP13.05□□□□□ -0.32
TNC-212ENST00000542877 RAB23Q9ULC3 237 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 TCAF1Q9Y4C2 921 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 EME2A4GXA9 379 aaPredicted RBP13.05□□□□□ -0.32
TNC-212ENST00000542877 CHST10O43529 356 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 NPHS1O60500 1241 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 PPP1R11O60927 126 aaPredicted RBP13.05□□□□□ -0.32
TNC-212ENST00000542877 UROSP10746 265 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 UGT1A5P35504 534 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 HNF4AP41235 474 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 STARP49675 285 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 IDH3AP50213 366 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 RHBDF2Q6PJF5 856 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 CACUL1Q86Y37 369 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 SVOPLQ8N434 492 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 CSGALNACT1Q8TDX6 532 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 APOLD1Q96LR9 279 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 SGK2Q9HBY8 427 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 HMX1Q9NP08 348 aaPredicted RBP13.05□□□□□ -0.32
TNC-212ENST00000542877 PTTG2Q9NZH5 202 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 SLC27A5Q9Y2P5 690 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 CNTNAP1P78357 1384 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 ACSL4O60488 711 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 CCNKO75909 580 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 CTSEP14091 401 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 PEX2P28328 305 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 FCHO2Q0JRZ9 810 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 AGAP2Q99490 1192 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 SEMA3GQ9NS98 782 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 FAM105AQ9NUU6 356 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 EXD2Q9NVH0 621 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 STK16O75716 305 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 SLC25A14O95258 325 aaPredicted RBP13.05□□□□□ -0.32
TNC-212ENST00000542877 CST3P01034 146 aaPredicted RBP13.05□□□□□ -0.32
TNC-212ENST00000542877 SLC35G4P0C7Q5 338 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 RHOQP17081 205 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 PSMA1P25786 263 aaKnown RBP13.05□□□□□ -0.32
TNC-212ENST00000542877 SDC2P34741 201 aa13.05□□□□□ -0.32
TNC-212ENST00000542877 CLK3P49761 638 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms