RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 CLTBP09497 229 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 TSPY3P0CV98 308 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 TSPY8P0CW00 308 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 FCGR1AP12314 374 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 RARGP13631 454 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 AGAP20933 346 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 SAT1P21673 171 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 GCH1P30793 250 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 ALDH1B1P30837 517 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 STIP1P31948 543 aaKnown RBP3.27□□□□□ -1.89
USP28-210ENST00000542033 PBX3P40426 434 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 GARSP41250 739 aaKnown RBP3.27□□□□□ -1.89
USP28-210ENST00000542033 LMAN1P49257 510 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 PEX5P50542 639 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 CDH8P55286 799 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 KRT83P78385 493 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 NUCB2P80303 420 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 ZBED6P86452 979 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 TSPY1Q01534 308 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 NIPAL4Q0D2K0 466 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 PRPF4BQ13523 1007 aaKnown RBP3.27□□□□□ -1.89
USP28-210ENST00000542033 SYCP1Q15431 976 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 NTRK2Q16620 822 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 TMEM266Q2M3C6 531 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 RAB41Q5JT25 222 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 AP1ARQ63HQ0 302 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 FBXO46Q6PJ61 603 aaPredicted RBP3.27□□□□□ -1.89
USP28-210ENST00000542033 CRELD2Q6UXH1 353 aaPredicted RBP3.27□□□□□ -1.89
USP28-210ENST00000542033 CHST9Q7L1S5 443 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 LCA5Q86VQ0 697 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 ZC3HC1Q86WB0 502 aaKnown RBP3.27□□□□□ -1.89
USP28-210ENST00000542033 VSIG1Q86XK7 387 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 ARHGAP12Q8IWW6 846 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 LMNTD2Q8IXW0 634 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 ZBTB2Q8N680 514 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 AGBL3Q8NEM8 1001 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 TMED6Q8WW62 240 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 GTF3C6Q969F1 213 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 CCDC47Q96A33 483 aaKnown RBP3.27□□□□□ -1.89
USP28-210ENST00000542033 MTBPQ96DY7 904 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 PGAM5Q96HS1 289 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 KRTAP1-5Q9BYS1 174 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 SLC35C2Q9NQQ7 365 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 MRPL15Q9P015 296 aaKnown RBP3.27□□□□□ -1.89
USP28-210ENST00000542033 SUCLA2Q9P2R7 463 aaPredicted RBP3.27□□□□□ -1.89
USP28-210ENST00000542033 RSPH14Q9UHP6 348 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 HAO1Q9UJM8 370 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 CDC14AQ9UNH5 594 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 MTMR6Q9Y217 621 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 JRKLQ9Y4A0 524 aa3.27□□□□□ -1.89
USP28-210ENST00000542033 KDRP35968 1356 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 A0A1B0GUL7 405 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 hDV102S1A0JD36 115 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 FRMD3A2A2Y4 597 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 TMEM202A6NGA9 273 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 CDRT15L2A8MXV6 281 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 A8MZ25 164 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 J3KR12 359 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 UBE2CO00762 179 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 WNT9BO14905 357 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 SCAMP1O15126 338 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 HSPA12AO43301 675 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 PAGE4O60829 102 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 REC8O95072 547 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 PAPSS2O95340 614 aaPredicted RBP3.26□□□□□ -1.89
USP28-210ENST00000542033 GLULP15104 373 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 ITGAXP20702 1163 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 MCM3P25205 808 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 ITGB8P26012 769 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 CDAP32320 146 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 STX2P32856 288 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 SHMT1P34896 483 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 CTNNA1P35221 906 aaKnown RBP3.26□□□□□ -1.89
USP28-210ENST00000542033 MAP2K2P36507 400 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 UBA7P41226 1012 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 DSCR9P59020 149 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 CBX1P83916 185 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 SORDQ00796 357 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 CSTF3Q12996 717 aaKnown RBP3.26□□□□□ -1.89
USP28-210ENST00000542033 MMEL1Q495T6 779 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 HECTD3Q5T447 861 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 CREB3L2Q70SY1 520 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 LINGO2Q7L985 606 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 ADGRA1Q86SQ6 560 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 SLC35F3Q8IY50 421 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 DSELQ8IZU8 1212 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 CLIP4Q8N3C7 705 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 DRAXINQ8NBI3 349 aaPredicted RBP3.26□□□□□ -1.89
USP28-210ENST00000542033 KCTD6Q8NC69 237 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 ANKRD20A12PQ8NF67 263 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 HUS1BQ8NHY5 278 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 NUDCD2Q8WVJ2 157 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 WASF1Q92558 559 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 PABPC5Q96DU9 382 aaKnown RBP3.26□□□□□ -1.89
USP28-210ENST00000542033 OR1F2PQ96R84 312 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 GLIS2Q9BZE0 524 aaPredicted RBP3.26□□□□□ -1.89
USP28-210ENST00000542033 TRIM7Q9C029 511 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 OR10A4Q9H209 315 aa3.26□□□□□ -1.89
USP28-210ENST00000542033 RWDD1Q9H446 243 aaPredicted RBP3.26□□□□□ -1.89
USP28-210ENST00000542033 PLEKHA4Q9H4M7 779 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms