RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 DHRS4Q9BTZ2 278 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 ZNF552Q9H707 407 aaPredicted RBP9.35□□□□□ -0.91
YBX3-211ENST00000541351 CPNE7Q9UBL6 633 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 SLC30A1Q9Y6M5 507 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 STAB1Q9NY15 2570 aa9.35□□□□□ -0.91
YBX3-211ENST00000541351 ACANP16112 2415 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 RTTNQ86VV8 2226 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 A0A1W2PQ67 120 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 PCDH17O14917 1159 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 PMPCBO75439 489 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 SCRG1O75711 98 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 PIGNO95427 931 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 MYL1P05976 194 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 ADSLP30566 484 aaPredicted RBP9.34□□□□□ -0.91
YBX3-211ENST00000541351 DNAJA1P31689 397 aaKnown RBP9.34□□□□□ -0.91
YBX3-211ENST00000541351 ACVRL1P37023 503 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 IST1P53990 364 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 SOX8P57073 446 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 FOXD4Q12950 439 aaPredicted RBP9.34□□□□□ -0.91
YBX3-211ENST00000541351 PDCLQ13371 301 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 PCOLCEQ15113 449 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 STK38Q15208 465 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 PYCR3Q53H96 274 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 DCAF17Q5H9S7 520 aaPredicted RBP9.34□□□□□ -0.91
YBX3-211ENST00000541351 TMTC4Q5T4D3 741 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 FAAH2Q6GMR7 532 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 RPUSD3Q6P087 351 aaKnown RBP9.34□□□□□ -0.91
YBX3-211ENST00000541351 KLHL35Q6PF15 583 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 DOK6Q6PKX4 331 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 TMEM200AQ86VY9 491 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 ZDHHC17Q8IUH5 632 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 PHYKPLQ8IUZ5 450 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 RBM12BQ8IXT5 1001 aaKnown RBP9.34□□□□□ -0.91
YBX3-211ENST00000541351 EID3Q8N140 333 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 PPM1KQ8N3J5 372 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 ZBTB2Q8N680 514 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 KIAA0895Q8NCT3 520 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 CPLX3Q8WVH0 158 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 ZNF514Q96K75 400 aaPredicted RBP9.34□□□□□ -0.91
YBX3-211ENST00000541351 CNDP1Q96KN2 507 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 GBP5Q96PP8 586 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 DPH2Q9BQC3 489 aaPredicted RBP9.34□□□□□ -0.91
YBX3-211ENST00000541351 TBC1D10AQ9BXI6 508 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 ENKD1Q9H0I2 346 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 CHST8Q9H2A9 424 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 SYNCQ9H7C4 482 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 FANCEQ9HB96 536 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 ATP13A2Q9NQ11 1180 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 PIGVQ9NUD9 493 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 EPHA6Q9UF33 1036 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 RPH3AQ9Y2J0 694 aaPredicted RBP9.34□□□□□ -0.91
YBX3-211ENST00000541351 ACTL7AQ9Y615 435 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 ANKRD36A6QL64 1941 aa9.34□□□□□ -0.91
YBX3-211ENST00000541351 CETN3O15182 167 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 GRAP2O75791 330 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 VIPP01282 170 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 JCHAINP01591 159 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 FUCA1P04066 466 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 RHOQP17081 205 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 GPR1P46091 355 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 CAPZBP47756 277 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 SULT1E1P49888 294 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 MEOX1P50221 254 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 TUBB4BP68371 445 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 CSNK1G2P78368 415 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 LRMPQ12912 555 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 CUL4BQ13620 913 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 TUBB2AQ13885 445 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 SSPNQ14714 243 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 PRKD1Q15139 912 aaPredicted RBP9.33□□□□□ -0.92
YBX3-211ENST00000541351 TAF5Q15542 800 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 AGAP7PQ5VUJ5 663 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 CES4AQ5XG92 561 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 RWDD4Q6NW29 188 aaKnown RBP9.33□□□□□ -0.92
YBX3-211ENST00000541351 IRGCQ6NXR0 463 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 TMEM26Q6ZUK4 368 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 SLC26A9Q7LBE3 791 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 C1orf131Q8NDD1 294 aaKnown RBP9.33□□□□□ -0.92
YBX3-211ENST00000541351 INTS4Q96HW7 963 aaKnown RBP9.33□□□□□ -0.92
YBX3-211ENST00000541351 PCMTD1Q96MG8 357 aaPredicted RBP9.33□□□□□ -0.92
YBX3-211ENST00000541351 AGAP4Q96P64 663 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 ZSWIM1Q9BR11 485 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 TUBB2BQ9BVA1 445 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 METTL14Q9HCE5 456 aaKnown RBP9.33□□□□□ -0.92
YBX3-211ENST00000541351 DLL4Q9NR61 685 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 KCND1Q9NSA2 647 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.33□□□□□ -0.92
YBX3-211ENST00000541351 ZNF212Q9UDV6 495 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 AJAP1Q9UKB5 411 aaPredicted RBP9.33□□□□□ -0.92
YBX3-211ENST00000541351 ST14Q9Y5Y6 855 aa9.33□□□□□ -0.92
YBX3-211ENST00000541351 COL6A5A8TX70 2615 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 PSMD11O00231 422 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 MEN1O00255 615 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 POLR2DO15514 142 aaKnown RBP9.32□□□□□ -0.92
YBX3-211ENST00000541351 TIAF1O95411 115 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 TYRP1P17643 537 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 AGXTP21549 392 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 OTX2P32243 289 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 POLD2P49005 469 aa9.32□□□□□ -0.92
YBX3-211ENST00000541351 NASPP49321 788 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms