RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 SRP72O76094 671 aaKnown RBP18.63■□□□□ 0.57
VPS33A-205ENST00000541169 PRAMEF1O95521 474 aa18.63■□□□□ 0.57
VPS33A-205ENST00000541169 ALPPL2P10696 532 aa18.63■□□□□ 0.57
VPS33A-205ENST00000541169 ITGALP20701 1170 aa18.63■□□□□ 0.57
VPS33A-205ENST00000541169 EIF2B5Q13144 721 aaKnown RBP18.63■□□□□ 0.57
VPS33A-205ENST00000541169 LRP8Q14114 963 aa18.63■□□□□ 0.57
VPS33A-205ENST00000541169 RNASEH2BQ5TBB1 312 aaKnown RBP18.63■□□□□ 0.57
VPS33A-205ENST00000541169 ALS2CLQ60I27 953 aa18.63■□□□□ 0.57
VPS33A-205ENST00000541169 PHACTR4Q8IZ21 702 aa18.63■□□□□ 0.57
VPS33A-205ENST00000541169 ZNF398Q8TD17 642 aa18.63■□□□□ 0.57
VPS33A-205ENST00000541169 SCG3Q8WXD2 468 aaKnown RBP18.63■□□□□ 0.57
VPS33A-205ENST00000541169 TTC1Q99614 292 aa18.63■□□□□ 0.57
VPS33A-205ENST00000541169 LGR4Q9BXB1 951 aa18.63■□□□□ 0.57
VPS33A-205ENST00000541169 SLC32A1Q9H598 525 aa18.63■□□□□ 0.57
VPS33A-205ENST00000541169 TRNAU1APQ9NX07 287 aaKnown RBP18.63■□□□□ 0.57
VPS33A-205ENST00000541169 NCKIPSDQ9NZQ3 722 aa18.63■□□□□ 0.57
VPS33A-205ENST00000541169 SAMD15Q9P1V8 674 aa18.63■□□□□ 0.57
VPS33A-205ENST00000541169 APOBEC3BQ9UH17 382 aaKnown RBP18.63■□□□□ 0.57
VPS33A-205ENST00000541169 UTP11Q9Y3A2 253 aaKnown RBP18.63■□□□□ 0.57
VPS33A-205ENST00000541169 TCAF1Q9Y4C2 921 aa18.63■□□□□ 0.57
VPS33A-205ENST00000541169 SLC30A1Q9Y6M5 507 aa18.63■□□□□ 0.57
VPS33A-205ENST00000541169 USP34Q70CQ2 3546 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 KLHL33A6NCF5 533 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 SDR42E2A6NKP2 422 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 AGAP14A8MT82 685 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 EFCAB8A8MWE9 144 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 FADS2P1A8MWK0 482 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 TPP1O14773 563 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 TTI1O43156 1089 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 CEACAM5P06731 702 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 CTSEP14091 401 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 CSRP1P21291 193 aaKnown RBP18.62■□□□□ 0.57
VPS33A-205ENST00000541169 DGKAP23743 735 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 PPARGP37231 505 aaPredicted RBP18.62■□□□□ 0.57
VPS33A-205ENST00000541169 GRIA1P42261 906 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 ACVR1Q04771 509 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 NFATC2Q13469 925 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 ALG11Q2TAA5 492 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 UAP1L1Q3KQV9 507 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 CERCAMQ5T4B2 595 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 TSTD2Q5T7W7 516 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 FAM151BQ6UXP7 276 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 SNX20Q7Z614 316 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 CEP112Q8N8E3 955 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.62■□□□□ 0.57
VPS33A-205ENST00000541169 ZNF514Q96K75 400 aaPredicted RBP18.62■□□□□ 0.57
VPS33A-205ENST00000541169 TTC25Q96NG3 672 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 CDC6Q99741 560 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 ERP44Q9BS26 406 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 NAT9Q9BTE0 207 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 IL21RQ9HBE5 538 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 EVA1BQ9NVM1 165 aa18.62■□□□□ 0.57
VPS33A-205ENST00000541169 CNOT6Q9ULM6 557 aaKnown RBP18.62■□□□□ 0.57
VPS33A-205ENST00000541169 DMDP11532 3685 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 CTAGE15A4D2H0 777 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 TMEM202A6NGA9 273 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 SCAMP1O15126 338 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 AQP9O43315 295 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 CTAGE8P0CG41 777 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 RALBP11234 206 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 CD59P13987 128 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 PAMP19021 973 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 IVDP26440 423 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 SESN2P58004 480 aaPredicted RBP18.61■□□□□ 0.57
VPS33A-205ENST00000541169 CAV1Q03135 178 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 CALCOCO2Q13137 446 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 SHBQ15464 509 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 CHRNA6Q15825 494 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 ATP13A5Q4VNC0 1218 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 GLE1Q53GS7 698 aaKnown RBP18.61■□□□□ 0.57
VPS33A-205ENST00000541169 DNAJC21Q5F1R6 531 aaKnown RBP18.61■□□□□ 0.57
VPS33A-205ENST00000541169 LYPLAL1Q5VWZ2 237 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 IZUMO3Q5VZ72 239 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 CTAGE6Q86UF2 777 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 GKN2Q86XP6 184 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 CCNJLQ8IV13 435 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 HID1Q8IV36 788 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 CTAGE4Q8IX94 777 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 PELI3Q8N2H9 469 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 DDHD1Q8NEL9 900 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 CDKN2AIPNLQ96HQ2 116 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 AGAP2Q99490 1192 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 KIFC1Q9BW19 673 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 ASB8Q9H765 288 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 NLGN3Q9NZ94 848 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 WHRNQ9P202 907 aa18.61■□□□□ 0.57
VPS33A-205ENST00000541169 F8W8V4 182 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 INPP4BO15327 924 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 BUD23O43709 281 aaKnown RBP18.6■□□□□ 0.57
VPS33A-205ENST00000541169 SEC31AO94979 1220 aaKnown RBP18.6■□□□□ 0.57
VPS33A-205ENST00000541169 ASMTLO95671 621 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 MAGEA3P43357 314 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 DRG2P55039 364 aaKnown RBP18.6■□□□□ 0.57
VPS33A-205ENST00000541169 PRAMEP78395 509 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 XIAPP98170 497 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 CACNG1Q06432 222 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 C2orf54Q08AI8 447 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 ILF3Q12906 894 aaKnown RBP eCLIP18.6■□□□□ 0.578e-6■■□□□ 11.6
VPS33A-205ENST00000541169 GTF2H3Q13889 308 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 PUM1Q14671 1186 aaKnown RBP eCLIP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms