RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	SUSD6	Q92537	303 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	DLG3	Q92796	817 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PLEKHA8	Q96JA3	519 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SLC45A3	Q96JT2	553 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	BTN2A3P	Q96KV6	586 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SPATA13	Q96N96	652 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RBBP8	Q99708	897 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	C2orf49	Q9BVC5	232 aa	Predicted RBP	5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	POLR1B	Q9H9Y6	1135 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SMOX	Q9NWM0	555 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	OXSM	Q9NWU1	459 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	EGFL7	Q9UHF1	273 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TLK1	Q9UKI8	766 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CORIN	Q9Y5Q5	1042 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CPQ	Q9Y646	472 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RNF103-CHMP3	A0A140T963	221 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	KANSL1L	A0AUZ9	987 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RFXAP	O00287	272 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	FGF10	O15520	208 aa	Predicted RBP	5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	KCNH1	O95259	989 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SBK3	P0C264	359 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ACADM	P11310	421 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	LMO2	P25791	158 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GABRB3	P28472	473 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GDI1	P31150	447 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MATK	P42679	507 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PLK1	P53350	603 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CSE1L	P55060	971 aa	Known RBP	5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GSTM4	Q03013	218 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	USP10	Q14694	798 aa	Known RBP	5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GRTP1	Q5TC63	336 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	LYSMD3	Q7Z3D4	306 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RNF135	Q8IUD6	432 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CROCCP3	Q8IVE0	287 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	LSMEM2	Q8N112	164 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SREK1	Q8WXA9	508 aa	Known RBP	5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GFM2	Q969S9	779 aa	Known RBP	5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	LRCH3	Q96II8	777 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	QKI	Q96PU8	341 aa	Known RBP eCLIP	5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CPNE1	Q99829	537 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	BBS2	Q9BXC9	721 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CIPC	Q9C0C6	399 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783		V9GYQ6	96 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	C1orf232	A0A0U1RR37	186 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783		H3BMQ9	156 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	B4GAT1	O43505	415 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	NUMB	P49757	651 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RENBP	P51606	427 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CLCN2	P51788	898 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	LIMK2	P53671	638 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	DAOA	P59103	153 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PITX1	P78337	314 aa	Predicted RBP	5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ADAM15	Q13444	863 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TEAD2	Q15562	447 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CYP2A13	Q16696	494 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	FBXO43	Q4G163	708 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SDHAF4	Q5VUM1	108 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	EGFLAM	Q63HQ2	1017 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	FAM171B	Q6P995	826 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	DCDC5	Q6ZRR9	648 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	STRADA	Q7RTN6	431 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	LRRC49	Q8IUZ0	686 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SLC41A1	Q8IVJ1	513 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZNF567	Q8N184	647 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	C12orf76	Q8N812	135 aa	Predicted RBP	5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ARL14EP	Q8N8R7	260 aa	Predicted RBP	5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	DDHD1	Q8NEL9	900 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SH3RF2	Q8TEC5	729 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SLC22A17	Q8WUG5	538 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	EDEM1	Q92611	657 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SLC35B4	Q969S0	331 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	5.65	□□□□□ -1.5	2e-6	■■■■■ 54.9
RAPGEF4-215	ENST00000540783	VPS39	Q96JC1	886 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CNDP1	Q96KN2	507 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	COG8	Q96MW5	612 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	BIRC8	Q96P09	236 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GPATCH1	Q9BRR8	931 aa	Known RBP	5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZNF670	Q9BS34	389 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RETREG1	Q9H6L5	497 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RPF2	Q9H7B2	306 aa	Known RBP	5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RMI1	Q9H9A7	625 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	KLHL8	Q9P2G9	620 aa	Predicted RBP	5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CACNG4	Q9UBN1	327 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SUN2	Q9UH99	717 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PADI4	Q9UM07	663 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	KIAA1217	Q5T5P2	1943 aa		5.65	□□□□□ -1.5
RAPGEF4-215	ENST00000540783		A0A1W2PQH9	124 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TMEM114	B3SHH9	223 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SPTLC1	O15269	473 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PSMD3	O43242	534 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	DLX3	O60479	287 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	LILRB3	O75022	631 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	HMOX2	P30519	316 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	MAPK8	P45983	427 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	EIF2B2	P49770	351 aa	Known RBP	5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	BMX	P51813	675 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SLC7A2	P52569	658 aa		5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	YBX1	P67809	324 aa	Known RBP	5.65	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	RHD	Q02161	417 aa		5.65	□□□□□ -1.51

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