RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 ESX1Q8N693 406 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 TEX26Q8N6G2 289 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 ENOX1Q8TC92 643 aaKnown RBP7.24□□□□□ -1.25
YBX3-209ENST00000540747 AP2M1Q96CW1 435 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 SLC38A3Q99624 504 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 TSPY26PQ9H489 355 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 EPB41L1Q9H4G0 881 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 UCK1Q9HA47 277 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 PCDHGA6Q9Y5G7 932 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 ADGRG1Q9Y653 693 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 RPS6KL1Q9Y6S9 549 aa7.24□□□□□ -1.25
YBX3-209ENST00000540747 TRBV23OR9-2A0A075B6M9 112 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 A0A0J9YYE9 177 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 LRRC10BA6NIK2 292 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 A8MU76 341 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 LGALS16A8MUM7 142 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 POLR1CO15160 346 aaPredicted RBP7.23□□□□□ -1.25
YBX3-209ENST00000540747 ATMINO43313 823 aaPredicted RBP7.23□□□□□ -1.25
YBX3-209ENST00000540747 TRBC1P01850 177 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 PYGLP06737 847 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 KRT7P08729 469 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 F3P13726 295 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 TCF4P15884 667 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 ZNF30P17039 623 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 CTPS1P17812 591 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 PSMA2P25787 234 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 NFKBIAP25963 317 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 IL1R2P27930 398 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 MAN1A1P33908 653 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 CLCNKAP51800 687 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 MLLT10P55197 1068 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 GFERP55789 205 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 MAXP61244 160 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 BIRC2Q13490 618 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 PPP6R3Q5H9R7 873 aaPredicted RBP7.23□□□□□ -1.25
YBX3-209ENST00000540747 HENMT1Q5T8I9 393 aaKnown RBP7.23□□□□□ -1.25
YBX3-209ENST00000540747 ARMC12Q5T9G4 340 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 DENND2CQ68D51 928 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 USP45Q70EL2 814 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 MARK2Q7KZI7 788 aaKnown RBP7.23□□□□□ -1.25
YBX3-209ENST00000540747 POLNQ7Z5Q5 900 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 APLFQ8IW19 511 aaPredicted RBP7.23□□□□□ -1.25
YBX3-209ENST00000540747 CCDC13Q8IYE1 715 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 GALNT11Q8NCW6 608 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 PDCD6IPQ8WUM4 868 aaKnown RBP7.23□□□□□ -1.25
YBX3-209ENST00000540747 NCSTNQ92542 709 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 C9orf72Q96LT7 481 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 CSPG4P5Q96PW8 444 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 ERGIC2Q96RQ1 377 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 LYSMD1Q96S90 227 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 HERPUD2Q9BSE4 406 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 RIOK2Q9BVS4 552 aaKnown RBP7.23□□□□□ -1.25
YBX3-209ENST00000540747 RBSNQ9H1K0 784 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 MLXIPLQ9NP71 852 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 PRDM8Q9NQV8 689 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 PARVAQ9NVD7 372 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 SEMA5BQ9P283 1151 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 PLEKHB1Q9UF11 243 aaPredicted RBP7.23□□□□□ -1.25
YBX3-209ENST00000540747 LIMA1Q9UHB6 759 aaKnown RBP7.23□□□□□ -1.25
YBX3-209ENST00000540747 PCSK1NQ9UHG2 260 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 DACH1Q9UI36 760 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 CD84Q9UIB8 345 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 CROTQ9UKG9 612 aa7.23□□□□□ -1.25
YBX3-209ENST00000540747 POLEQ07864 2286 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 ESPL1Q14674 2120 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 KIR2DS5A0A0G2JLQ3 304 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 A0A0G2JNG1 304 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 SYCE3A1L190 88 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 FADS2P1A8MWK0 482 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 MKRN2OSH3BPM6 223 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 KIR2DS3K7RE56 304 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 TOX3O15405 576 aaPredicted RBP7.22□□□□□ -1.25
YBX3-209ENST00000540747 DAPK3O43293 454 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 PRPSAP2O60256 369 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 RFPL1O75677 317 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 SORBS2O94875 1100 aaKnown RBP7.22□□□□□ -1.25
YBX3-209ENST00000540747 FGF5P12034 268 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 AMPD1P23109 780 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 MSNP26038 577 aaKnown RBP7.22□□□□□ -1.25
YBX3-209ENST00000540747 PCK1P35558 622 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 MMP13P45452 471 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 COPB1P53618 953 aaKnown RBP7.22□□□□□ -1.25
YBX3-209ENST00000540747 CDH6P55285 790 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 NFATC2Q13469 925 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 SEPT6Q14141 434 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 KIR2DS5Q14953 304 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 SNAP47Q5SQN1 464 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 PAPD7Q5XG87 772 aaKnown RBP7.22□□□□□ -1.25
YBX3-209ENST00000540747 C16orf46Q6P387 395 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 C6orf15Q6UXA7 325 aaPredicted RBP7.22□□□□□ -1.25
YBX3-209ENST00000540747 ASB18Q6ZVZ8 466 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 LYSMD3Q7Z3D4 306 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 PRSS42Q7Z5A4 293 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 TMEM135Q86UB9 458 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 SLC9B2Q86UD5 537 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 ATCAYQ86WG3 371 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 AOPEPQ8N6M6 819 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 EXD1Q8NHP7 514 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 ARRDC2Q8TBH0 407 aa7.22□□□□□ -1.25
YBX3-209ENST00000540747 MAML1Q92585 1016 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms