RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 TTC25Q96NG3 672 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 AGAP3Q96P47 875 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 OLFM3Q96PB7 478 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 PLEKHG4BQ96PX9 1271 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 RIOK2Q9BVS4 552 aaKnown RBP10.32□□□□□ -0.76
CDCA3-208ENST00000540683 CARD9Q9H257 536 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 ASCL3Q9NQ33 180 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 FAM153AQ9UHL3 310 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 ACSL6Q9UKU0 697 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 PNMA8BQ9ULN7 279 aaPredicted RBP10.32□□□□□ -0.76
CDCA3-208ENST00000540683 PCDHA13Q9Y5I0 950 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 ALG6Q9Y672 507 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 RP1P56715 2156 aa10.32□□□□□ -0.76
CDCA3-208ENST00000540683 ZFYVE26Q68DK2 2539 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 GOLGA6L9A6NEM1 432 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 C3orf70A6NLC5 250 aaPredicted RBP10.31□□□□□ -0.76
CDCA3-208ENST00000540683 BTNL10A8MVZ5 291 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 CDRT15L2A8MXV6 281 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 ERVH48-1M5A8F1 160 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 NVLO15381 856 aaKnown RBP10.31□□□□□ -0.76
CDCA3-208ENST00000540683 KLK10O43240 276 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 TLX3O43711 291 aaPredicted RBP10.31□□□□□ -0.76
CDCA3-208ENST00000540683 DUX1O43812 170 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 VEGFDO43915 354 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 CST8O60676 142 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 ANXA9O76027 345 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 SLC25A14O95258 325 aaPredicted RBP10.31□□□□□ -0.76
CDCA3-208ENST00000540683 CLDN7O95471 211 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 FGF1P05230 155 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 CELA2BP08218 269 aaPredicted RBP10.31□□□□□ -0.76
CDCA3-208ENST00000540683 MYF5P13349 255 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 TNNT1P13805 278 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 HLA-DPA1P20036 260 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 ALDH4A1P30038 563 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 FASLGP48023 281 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 CLCNKAP51800 687 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 EPHA4P54764 986 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 CLDN6P56747 220 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 RAB15P59190 212 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 SKOR1P84550 965 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 ZFP36L1Q07352 338 aaKnown RBP10.31□□□□□ -0.76
CDCA3-208ENST00000540683 SLC10A2Q12908 348 aaPredicted RBP10.31□□□□□ -0.76
CDCA3-208ENST00000540683 PRPSAP1Q14558 356 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 TAZQ16635 292 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 QPCTQ16769 361 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 PYCR3Q53H96 274 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 HENMT1Q5T8I9 393 aaKnown RBP10.31□□□□□ -0.76
CDCA3-208ENST00000540683 DOK6Q6PKX4 331 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 SLC30A9Q6PML9 568 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 C17orf82Q86X59 251 aaPredicted RBP10.31□□□□□ -0.76
CDCA3-208ENST00000540683 RBM12BQ8IXT5 1001 aaKnown RBP10.31□□□□□ -0.76
CDCA3-208ENST00000540683 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.31□□□□□ -0.76
CDCA3-208ENST00000540683 TRAM1L1Q8N609 369 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 Q8N9G6 341 aaPredicted RBP10.31□□□□□ -0.76
CDCA3-208ENST00000540683 OR4D9Q8NGE8 314 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 TEKT5Q96M29 485 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 SLC38A3Q99624 504 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 SPATA16Q9BXB7 569 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 FSD1LQ9BXM9 530 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 ASPSCR1Q9BZE9 553 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 PRORYQ9H606 182 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 GLOD4Q9HC38 313 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 TRIM39Q9HCM9 518 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 KCNK4Q9NYG8 393 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 KLHL8Q9P2G9 620 aaPredicted RBP10.31□□□□□ -0.76
CDCA3-208ENST00000540683 CD84Q9UIB8 345 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 AAR2Q9Y312 384 aaKnown RBP10.31□□□□□ -0.76
CDCA3-208ENST00000540683 PKP3Q9Y446 797 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 RNF215Q9Y6U7 377 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 CACNA1GO43497 2377 aa10.31□□□□□ -0.76
CDCA3-208ENST00000540683 BPTFQ12830 3046 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 APOC4-APOC2K7ER74 178 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 KMOO15229 486 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 GRID2O43424 1007 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 TJP3O95049 919 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 MAP3K6O95382 1288 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 ECEL1O95672 775 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 PRLP01236 227 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 APOC2P02655 101 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 PYGMP11217 842 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 CSTF2P33240 577 aaKnown RBP eCLIP10.3□□□□□ -0.76
CDCA3-208ENST00000540683 UGT1A5P35504 534 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 HMGCLP35914 325 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 GEMP55040 296 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 DYNLT1P63172 113 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 CXADRP78310 365 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 VAC14Q08AM6 782 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 NIPAL4Q0D2K0 466 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 MPP3Q13368 585 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 ITGA9Q13797 1035 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 PRKD1Q15139 912 aaPredicted RBP10.3□□□□□ -0.76
CDCA3-208ENST00000540683 PHF19Q5T6S3 580 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 WDR74Q6RFH5 385 aaPredicted RBP10.3□□□□□ -0.76
CDCA3-208ENST00000540683 SPOCD1Q6ZMY3 1216 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 CCDC81Q6ZN84 652 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 LYSMD3Q7Z3D4 306 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 JAMLQ86YT9 394 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 UBL4BQ8N7F7 174 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 TC2NQ8N9U0 490 aa10.3□□□□□ -0.76
CDCA3-208ENST00000540683 TTC13Q8NBP0 860 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms