RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 PSMA3P25788 255 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 IVDP26440 423 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 HTR1BP28222 390 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 RXRGP48443 463 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 ARRB1P49407 418 aaPredicted RBP6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 TERF1P54274 439 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 IL9RQ01113 521 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 CKAP4Q07065 602 aaKnown RBP6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 SLC14A1Q13336 389 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 SEPT6Q14141 434 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 PTPRCAPQ14761 206 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 WHAMMP3Q1A5X7 153 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 ALG11Q2TAA5 492 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 PRAMEF14Q5SWL7 426 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 CERCAMQ5T4B2 595 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 RNASEH2BQ5TBB1 312 aaKnown RBP6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 ZDHHC20Q5W0Z9 365 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 PDPK2PQ6A1A2 396 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 LRRC8BQ6P9F7 803 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 SYDE1Q6ZW31 735 aaPredicted RBP6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 TRIM74Q86UV6 250 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 PPIL6Q8IXY8 311 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 PHACTR4Q8IZ21 702 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 RBFAQ8N0V3 343 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 TRAM1L1Q8N609 369 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 NAT8LQ8N9F0 302 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 OR4K2Q8NGD2 314 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 OR56A4Q8NGH8 313 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 OR13C4Q8NGS5 318 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 DTX3LQ8TDB6 740 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 SAP25Q8TEE9 199 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 PTCD2Q8WV60 388 aaKnown RBP6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 OR1E3Q8WZA6 343 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 ZNF592Q92610 1267 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 HIC2Q96JB3 615 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 DNAJC1Q96KC8 554 aaKnown RBP6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 VPS35Q96QK1 796 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 RANBP9Q96S59 729 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 KRT12Q99456 494 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 LRRC61Q9BV99 259 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 SPATA16Q9BXB7 569 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 FRMD8Q9BZ67 464 aaPredicted RBP6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 IL26Q9NPH9 171 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 PHPT1Q9NRX4 125 aaPredicted RBP6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 TM7SF3Q9NS93 570 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 NLE1Q9NVX2 485 aaPredicted RBP6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 SMOXQ9NWM0 555 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 DNAJC28Q9NX36 388 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 KLQ9UEF7 1012 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 ASIC3Q9UHC3 531 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 FKBPLQ9UIM3 349 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 CNOT6Q9ULM6 557 aaKnown RBP6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 SLC17A4Q9Y2C5 497 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 PCDHGB2Q9Y5G2 931 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 COL27A1Q8IZC6 1860 aaPredicted RBP6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 PIKFYVEQ9Y2I7 2098 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 PRSS38A1L453 326 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 HEATR9A2RTY3 570 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 AGAP14A8MT82 685 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 H3BM21 787 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 H7C0S8 307 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 AP3B1O00203 1094 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 CCL22O00626 93 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 TNFRSF10CO14798 259 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 SLC30A4O14863 429 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 TM4SF5O14894 197 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 FLRT2O43155 660 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 RAD51CO43502 376 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 SDC3O75056 442 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 PIAS2O75928 621 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 SEC31AO94979 1220 aaKnown RBP6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 RASGRP1O95267 797 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 FUCA1P04066 466 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 CEACAM5P06731 702 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 MLNP12872 115 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 JUNDP17535 347 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 KELP23276 732 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 CA5AP35218 305 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 ADCY8P40145 1251 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 HADHAP40939 763 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 MAGEA3P43357 314 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 HK3P52790 923 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 SRP54P61011 504 aaKnown RBP6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 HNRNPKP61978 463 aaKnown RBP eCLIP6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 CRADDP78560 199 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 XIAPP98170 497 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 PPARDQ03181 441 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 ACVR1Q04771 509 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 BNIP3Q12983 259 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 PEX6Q13608 980 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 ITGA9Q13797 1035 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 DSG2Q14126 1118 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 UAP1L1Q3KQV9 507 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 ATP13A5Q4VNC0 1218 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 CCDC38Q502W7 563 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 ZNF542PQ5EBM4 170 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 IZUMO3Q5VZ72 239 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 ENPP7Q6UWV6 458 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 FAM151BQ6UXP7 276 aa6.92□□□□□ -1.3
LPCAT3-209ENST00000540060 DBX2Q6ZNG2 339 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms