RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 ACOX2Q99424 681 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 CNGB3Q9NQW8 809 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 RGS18Q9NS28 235 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 INTS10Q9NVR2 710 aaKnown RBP13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 GID8Q9NWU2 228 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 PCDHGA11Q9Y5H2 935 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 FNDC1Q4ZHG4 1894 aaPredicted RBP13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 NYNRINQ9P2P1 1898 aaKnown RBP13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 MIA3Q5JRA6 1907 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 RALGAPA2Q2PPJ7 1873 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 ZNF236Q9UL36 1845 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 NCF1BA6NI72 391 aaPredicted RBP13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 TTC36A6NLP5 189 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 NCF1CA8MVU1 366 aaPredicted RBP13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 PTGESO14684 152 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 CNTN5O94779 1100 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 SLC25A27O95847 323 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 C1RP00736 705 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 HTR1AP08908 422 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 NCF1P14598 390 aaPredicted RBP13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 CD1DP15813 335 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 DNAJB2P25686 324 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 HOXD12P35452 270 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 CD86P42081 329 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 KCNC4Q03721 635 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 ABHD11Q8NFV4 315 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 ZC3H15Q8WU90 426 aaKnown RBP13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 TRUB1Q8WWH5 349 aaKnown RBP13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 SMURF2Q9HAU4 748 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 MRGBPQ9NV56 204 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 GNPTGQ9UJJ9 305 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 UTS2RQ9UKP6 389 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 IKZF3Q9UKT9 509 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 WDR37Q9Y2I8 494 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 GPR45Q9Y5Y3 372 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 TMEM247A6NEH6 219 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 UPK1AO00322 258 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 GABRDO14764 452 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 NOBOXO60393 691 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 PIRTP0C851 137 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 LBPP18428 481 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 PNPLA4P41247 253 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 LAPTM5Q13571 262 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 SELPLGQ14242 412 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 MEP1AQ16819 746 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 DALRD3Q5D0E6 543 aaKnown RBP13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 GTF2IRD2BQ6EKJ0 949 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 PRMT9Q6P2P2 845 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 GTF2IRD2Q86UP8 949 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 FAM86B1Q8N7N1 296 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 PDPRQ8NCN5 879 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 DNAJB3Q8WWF6 145 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 NT5MQ9NPB1 228 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 DAPK2Q9UIK4 370 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 PSME2Q9UL46 239 aa13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 RBMX2Q9Y388 322 aaKnown RBP13.86□□□□□ -0.19
SCNN1A-215ENST00000540037 CLASP2O75122 1294 aaKnown RBP13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 WISP3O95389 354 aaPredicted RBP13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 AGXTP21549 392 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 IL12AP29459 219 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 RAD23AP54725 363 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 ARSFP54793 590 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 TMBIM6P55061 237 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 DSC2Q02487 901 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 SEMA3AQ14563 771 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 SLC14A2Q15849 920 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 TRIM16LQ309B1 348 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 RAB41Q5JT25 222 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 ZNF362Q5T0B9 420 aaPredicted RBP13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 UBXN11Q5T124 520 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 KANK2Q63ZY3 851 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 SLC2A7Q6PXP3 512 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 C14orf80Q86SX3 495 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 STK32CQ86UX6 486 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 TOP6BLQ8N6T0 577 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 TMBIM1Q969X1 311 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 SENP8Q96LD8 212 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 TBATAQ96M53 351 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 HBEGFQ99075 208 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 TRMOQ9BU70 441 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 IPPQ9Y573 584 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 PCDHGA8Q9Y5G5 932 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 TNS1Q9HBL0 1735 aaKnown RBP13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 PAGE1O75459 146 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 DARSP14868 501 aaKnown RBP13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 FSHRP23945 695 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 PIGAP37287 484 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 AGTR2P50052 363 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 IFITM3Q01628 133 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 DPY19L1Q2PZI1 675 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 PAN2Q504Q3 1202 aaKnown RBP13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 TFAP2DQ7Z6R9 452 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 TBC1D21Q8IYX1 336 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 CLEC4FQ8N1N0 589 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 SFRP1Q8N474 314 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 C3orf58Q8NDZ4 430 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 PAAF1Q9BRP4 392 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 BEGAINQ9BUH8 593 aa13.85□□□□□ -0.19
SCNN1A-215ENST00000540037 FUNDC2Q9BWH2 189 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms