RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 COQ4Q9Y3A0 265 aa14.49□□□□□ -0.09
CACNB1-206ENST00000539338 NBNO60934 754 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 UMPSP11172 480 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 COL6A2P12110 1019 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 IFNGR2P38484 337 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 GSTM5P46439 218 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 XIAPP98170 497 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 SLC35G1Q2M3R5 365 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 RGS21Q2M5E4 152 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 ESRP1Q6NXG1 681 aaKnown RBP14.48□□□□□ -0.09
CACNB1-206ENST00000539338 VSTM1Q6UX27 236 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 CACTIN-AS1Q8N1I8 211 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 AGAP2Q99490 1192 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 XRN1Q8IZH2 1706 aaKnown RBP14.48□□□□□ -0.09
CACNB1-206ENST00000539338 SEC24AO95486 1093 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 CFHP08603 1231 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 SLC10A6Q3KNW5 377 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 RFWD3Q6PCD5 774 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 HDDC2Q7Z4H3 204 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 OR2T12Q8NG77 320 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 LPGAT1Q92604 370 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 QRFPRQ96P65 431 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 TSSK3Q96PN8 268 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 SSU72Q9NP77 194 aaKnown RBP14.48□□□□□ -0.09
CACNB1-206ENST00000539338 SPATA6Q9NWH7 488 aaPredicted RBP14.48□□□□□ -0.09
CACNB1-206ENST00000539338 KPNA5O15131 536 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 EIF2S1P05198 315 aaKnown RBP14.48□□□□□ -0.09
CACNB1-206ENST00000539338 TCF4P15884 667 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 NEK10Q6ZWH5 1172 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 TWIST2Q8WVJ9 160 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 ATOH1Q92858 354 aaPredicted RBP14.48□□□□□ -0.09
CACNB1-206ENST00000539338 PCED1BQ96HM7 432 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 HOPXQ9BPY8 73 aaPredicted RBP14.48□□□□□ -0.09
CACNB1-206ENST00000539338 ABCB10Q9NRK6 738 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 RGS17Q9UGC6 210 aaPredicted RBP14.48□□□□□ -0.09
CACNB1-206ENST00000539338 HMGXB4Q9UGU5 601 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 GNEQ9Y223 722 aaKnown RBP14.48□□□□□ -0.09
CACNB1-206ENST00000539338 CPSF7Q8N684 471 aaKnown RBP14.48□□□□□ -0.09
CACNB1-206ENST00000539338 ADCY4Q8NFM4 1077 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 CXorf40AQ8TE69 158 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 PHF10Q8WUB8 498 aaKnown RBP14.48□□□□□ -0.09
CACNB1-206ENST00000539338 ANKRD49Q8WVL7 239 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 WDR60Q8WVS4 1066 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 ITCHQ96J02 903 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 GATA5Q9BWX5 397 aaPredicted RBP14.48□□□□□ -0.09
CACNB1-206ENST00000539338 TOR4AQ9NXH8 423 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 SPATA2Q9UM82 520 aa14.48□□□□□ -0.09
CACNB1-206ENST00000539338 CENPXA8MT69 81 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 MAN2B1O00754 1011 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 SPATA31D3P0C874 917 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 UAP1L1Q3KQV9 507 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 LSM12Q3MHD2 195 aaKnown RBP14.47□□□□□ -0.09
CACNB1-206ENST00000539338 TIMM50Q3ZCQ8 353 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 DRICH1Q6PGQ1 229 aaPredicted RBP14.47□□□□□ -0.09
CACNB1-206ENST00000539338 KLHL17Q6TDP4 642 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 SPATA31D4Q6ZUB0 917 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 TAC4Q86UU9 113 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 LENG1Q96BZ8 264 aaPredicted RBP14.47□□□□□ -0.09
CACNB1-206ENST00000539338 GPR21Q99679 349 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 FANCEQ9HB96 536 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 ADGRE2Q9UHX3 823 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 GRIN2DO15399 1336 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 FAM149AA5PLN7 773 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 BBIP1A8MTZ0 92 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 AGRPO00253 132 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 BMP10O95393 424 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 FTH1P02794 183 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 MT-ND1P03886 318 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 PKMP14618 531 aaKnown RBP14.47□□□□□ -0.09
CACNB1-206ENST00000539338 CCNA2P20248 432 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 SPIBQ01892 262 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 PTSQ03393 145 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 TRIM71Q2Q1W2 868 aaKnown RBP14.47□□□□□ -0.09
CACNB1-206ENST00000539338 LYPLAL1Q5VWZ2 237 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 CDC73Q6P1J9 531 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 PROSER1Q86XN7 944 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 ARMC8Q8IUR7 673 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 MYO19Q96H55 970 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 NTPCRQ9BSD7 190 aaKnown RBP14.47□□□□□ -0.09
CACNB1-206ENST00000539338 NKX2-4Q9H2Z4 354 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 LRRC72A6NJI9 287 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 H3BM21 787 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 EOMESO95936 686 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 ITPKAP23677 461 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 FSHRP23945 695 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 CCR4P51679 360 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 ERVK-21P61565 698 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 STX4Q12846 297 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 CCDC28BQ9BUN5 200 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 DEC1Q9P2X7 70 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 ANGPT4Q9Y264 503 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 TCAF1Q9Y4C2 921 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.47□□□□□ -0.09
CACNB1-206ENST00000539338 G3V2T6 193 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 DHX15O43143 795 aaKnown RBP14.47□□□□□ -0.09
CACNB1-206ENST00000539338 IDH3AP50213 366 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 WDR4P57081 412 aaKnown RBP14.47□□□□□ -0.09
CACNB1-206ENST00000539338 LILRA4P59901 499 aa14.47□□□□□ -0.09
CACNB1-206ENST00000539338 UBE2R2Q712K3 238 aaPredicted RBP14.47□□□□□ -0.09
CACNB1-206ENST00000539338 UBE2E3Q969T4 207 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms