RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 ANKS6Q68DC2 871 aa11.35□□□□□ -0.59
SLC28A1-204ENST00000538177 TXNDC8Q6A555 127 aa11.35□□□□□ -0.59
SLC28A1-204ENST00000538177 ZFP1Q6P2D0 407 aa11.35□□□□□ -0.59
SLC28A1-204ENST00000538177 CMTR2Q8IYT2 770 aaKnown RBP11.35□□□□□ -0.59
SLC28A1-204ENST00000538177 KCNJ9Q92806 393 aa11.35□□□□□ -0.59
SLC28A1-204ENST00000538177 USP13Q92995 863 aaPredicted RBP11.35□□□□□ -0.59
SLC28A1-204ENST00000538177 MIEF2Q96C03 454 aa11.35□□□□□ -0.59
SLC28A1-204ENST00000538177 SLC25A23Q9BV35 468 aa11.35□□□□□ -0.59
SLC28A1-204ENST00000538177 AKTIPQ9H8T0 292 aa11.35□□□□□ -0.59
SLC28A1-204ENST00000538177 ZNF711Q9Y462 761 aa11.35□□□□□ -0.59
SLC28A1-204ENST00000538177 PCDHB9Q9Y5E1 797 aa11.35□□□□□ -0.59
SLC28A1-204ENST00000538177 PCDHGA7Q9Y5G6 932 aa11.35□□□□□ -0.59
SLC28A1-204ENST00000538177 CPQQ9Y646 472 aa11.35□□□□□ -0.59
SLC28A1-204ENST00000538177 ATP6AP2A0A1C7CYW4 349 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 PEX1O43933 1283 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 NIPSNAP2O75323 286 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 ATP6AP2O75787 350 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 PGLSO95336 258 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 MT-CO1P00395 513 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 ESR1P03372 595 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 RPS17P08708 135 aaKnown RBP11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 GPX3P22352 226 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 EEF1DP29692 281 aaKnown RBP11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 HMGCLP35914 325 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 CACNG1Q06432 222 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 CDH18Q13634 790 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 ATXN7L2Q5T6C5 722 aaPredicted RBP11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 FAM219BQ5XKK7 198 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 REP15Q6BDI9 236 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 FAM117BQ6P1L5 589 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 TXNDC11Q6PKC3 985 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 HACD2Q6Y1H2 254 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 TMCO2Q7Z6W1 182 aaPredicted RBP11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 PDSS2Q86YH6 399 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 STK40Q8N2I9 435 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 CD200R1Q8TD46 325 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 TRPC4APQ8TEL6 797 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 GDPD5Q8WTR4 605 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 UCMAQ8WVF2 138 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 TWIST2Q8WVJ9 160 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 PIH1D2Q8WWB5 315 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 GATA6Q92908 595 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 EID2BQ96D98 161 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 NR1H4Q96RI1 486 aaPredicted RBP11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 C19orf43Q9BQ61 176 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 KLHL4Q9C0H6 718 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 FBRSL1Q9HCM7 1045 aaKnown RBP11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 MRPL40Q9NQ50 206 aaKnown RBP11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 MRPL17Q9NRX2 175 aaKnown RBP11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 CCDC167Q9P0B6 97 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 C6orf203Q9P0P8 240 aaPredicted RBP11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 TRMT6Q9UJA5 497 aaKnown RBP11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 TMCO1Q9UM00 188 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 PKP3Q9Y446 797 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 ASB3Q9Y575 518 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 PLXNA4Q9HCM2 1894 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 NPEPPSL1A6NEC2 478 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 BTN3A1O00481 513 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 TRIM38O00635 465 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 PIP5K1BO14986 540 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 TEX28O15482 410 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 PRAMEF12O95522 483 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 ALDOCP09972 364 aaKnown RBP11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 FOXA1P55317 472 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 IL2P60568 153 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 RPL26P61254 145 aaKnown RBP11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 DEFB103AP81534 67 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 EML3Q32P44 896 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 ARMC12Q5T9G4 340 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 RETSATQ6NUM9 610 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 HTR3DQ70Z44 454 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 PHYKPLQ8IUZ5 450 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 FUNDC1Q8IVP5 155 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 PQLC1Q8N2U9 271 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 PLCD3Q8N3E9 789 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 SIDT2Q8NBJ9 832 aaKnown RBP11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 MICAL1Q8TDZ2 1067 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 DLG3Q92796 817 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 C2orf49Q9BVC5 232 aaPredicted RBP11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 CRISPLD2Q9H0B8 497 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 P2RY12Q9H244 342 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 TUBB1Q9H4B7 451 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 TMEM39AQ9NV64 488 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 GBF1Q92538 1859 aa11.34□□□□□ -0.59
SLC28A1-204ENST00000538177 A0A0U1RQS6 177 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 K7ERQ8 282 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 NRP2O60462 931 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 CSNK1DP48730 415 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 STX1BP61266 288 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 MMEL1Q495T6 779 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 MPP7Q5T2T1 576 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 OGFRL1Q5TC84 451 aaPredicted RBP11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 LPCAT4Q643R3 524 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 C8orf82Q6P1X6 216 aaPredicted RBP11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 GAREM2Q75VX8 874 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 TAS2R42Q7RTR8 314 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 APCDD1Q8J025 514 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 CPXM2Q8N436 756 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 ZNF483Q8TF39 744 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms