RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 AP1S2P56377 157 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 MVKQ03426 396 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 PIGFQ07326 219 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 RGS1Q08116 209 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 MEP1AQ16819 746 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 HADHQ16836 314 aaKnown RBP8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 AOC3Q16853 763 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 SPATS1Q496A3 300 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 AGKQ53H12 422 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 TREML2Q5T2D2 321 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 ATF7IP2Q5U623 682 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 RAP1GAP2Q684P5 730 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 C1orf186Q6ZWK4 172 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 KCT2Q8NC54 265 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 OR8H1Q8NGG4 311 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 SEMA4DQ92854 862 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 ACSF2Q96CM8 615 aaPredicted RBP8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 SCYL1Q96KG9 808 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 FIZ1Q96SL8 496 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 SP110Q9HB58 689 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 TMEM8AQ9HCN3 771 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 RBAKQ9NYW8 714 aaPredicted RBP8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 SLC9A2Q9UBY0 812 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 PRELID3BQ9Y3B1 194 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 HSPE1-MOB4S4R3N1 261 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 UBR2Q8IWV8 1755 aa8.5□□□□□ -1.05
SRGAP1-202ENST00000537556 TAF1LQ8IZX4 1826 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 F8VP50 259 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 BTN3A3O00478 584 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 PPM1BO75688 479 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 HPRP00739 348 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 CHRNGP07510 517 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 APRTP07741 180 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 MYL3P08590 195 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 USP17L8P0C7I0 530 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 CLEC2LP0C7M8 214 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 ZNF250P15622 560 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 PRKAR1BP31321 381 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 CD68P34810 354 aaPredicted RBP8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 GMPRP36959 345 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 ETV6P41212 452 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 NR2C2P49116 596 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 CPT1AP50416 773 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 RPL7AP62424 266 aaKnown RBP8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 NOMO3P69849 1222 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 SLAMF1Q13291 335 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 PRPSAP1Q14558 356 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 FAM209BQ5JX69 171 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 C8orf82Q6P1X6 216 aaPredicted RBP8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 RFX6Q8HWS3 928 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 CDH26Q8IXH8 852 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 NAT16Q8N8M0 369 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 ZBTB44Q8NCP5 570 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 PAPD5Q8NDF8 572 aaKnown RBP8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 OR4M2Q8NGB6 313 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 TBCBQ99426 244 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 GTPBP2Q9BX10 602 aaKnown RBP8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 STRA6Q9BX79 667 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 PITHD1Q9GZP4 211 aaPredicted RBP8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 PCDHB16Q9NRJ7 776 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 OXSMQ9NWU1 459 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 CCDC167Q9P0B6 97 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 INTS6Q9UL03 887 aaKnown RBP8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 PNMA8BQ9ULN7 279 aaPredicted RBP8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 SNX6Q9UNH7 406 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 HSPB11Q9Y547 144 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 BTN3A1O00481 513 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 KATNA1O75449 491 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 GCP02774 474 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 TP53P04637 393 aaPredicted RBP8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 POU3F3P20264 500 aaPredicted RBP8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 MAOBP27338 520 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 HNF1BP35680 557 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 IKZF1Q13422 519 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 CLCA4Q14CN2 919 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 TSC22D1Q15714 1073 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 TAB1Q15750 504 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 FBXO43Q4G163 708 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 ARL13AQ5H913 290 aaPredicted RBP8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 ARMCX4Q5H9R4 360 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 TIGD7Q6NT04 549 aaPredicted RBP8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 LAYNQ6UX15 382 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 ZNF782Q6ZMW2 699 aaPredicted RBP8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 UFD1Q92890 307 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 NSUN4Q96CB9 384 aaKnown RBP8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 PDXPQ96GD0 296 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 ZNF416Q9BWM5 594 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 HDHD5Q9BXW7 423 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 NXF2Q9GZY0 626 aaKnown RBP8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 PRDM11Q9NQV5 511 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 GTF2IRD1Q9UHL9 959 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 GLS2Q9UI32 602 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 TLK1Q9UKI8 766 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 USP22Q9UPT9 525 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 TPRKBQ9Y3C4 175 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 C3orf70A6NLC5 250 aaPredicted RBP8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 G3V2L1 256 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 TFECO14948 347 aaPredicted RBP8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 INPP4BO15327 924 aa8.49□□□□□ -1.05
SRGAP1-202ENST00000537556 SSX4O60224 188 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms