RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 E5RI56 91 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 STX16-NPEPL1H3BU86 382 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 STX16O14662 325 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 CFLARO15519 480 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 TGM5O43548 720 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 OR1I1O60431 355 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 NIPSNAP2O75323 286 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 MT-CO1P00395 513 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 TIMP1P01033 207 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 CSF2RAP15509 400 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 CSNK1DP48730 415 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 IL2P60568 153 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 STX1BP61266 288 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 LCP2Q13094 533 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 PTK2BQ14289 1009 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 UGT3A2Q3SY77 523 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 AGKQ53H12 422 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 MPP7Q5T2T1 576 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 KANK2Q63ZY3 851 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 UGT3A1Q6NUS8 523 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 TXNDC11Q6PKC3 985 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 CCDC149Q6ZUS6 474 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 LARP4Q71RC2 724 aaKnown RBP eCLIP15.56■□□□□ 0.08
MKS1-204ENST00000537529 GAREM2Q75VX8 874 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 LYSMD3Q7Z3D4 306 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 METTL3Q86U44 580 aaKnown RBP15.56■□□□□ 0.08
MKS1-204ENST00000537529 APCDD1Q8J025 514 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 SIDT2Q8NBJ9 832 aaKnown RBP15.56■□□□□ 0.08
MKS1-204ENST00000537529 NPAS2Q99743 824 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 VCX3BQ9H321 246 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 IKZF3Q9UKT9 509 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 LRRC14BA6NHZ5 514 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 K7ERQ8 282 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 CDC7O00311 574 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 FGF18O76093 207 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 CNPP09543 421 aaKnown RBP15.56■□□□□ 0.08
MKS1-204ENST00000537529 CTSAP10619 480 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 CTPS1P17812 591 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 HMGCLP35914 325 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 THOP1P52888 689 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 XIAPP98170 497 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 BCL2L1Q07817 233 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 PTPRRQ15256 657 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 ZNF423Q2M1K9 1284 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 ANKS6Q68DC2 871 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 CERS6Q6ZMG9 384 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 TMC8Q8IU68 726 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 HS6ST3Q8IZP7 471 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 ELMOD1Q8N336 334 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 HIPK4Q8NE63 616 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 CD200R1Q8TD46 325 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 TRPC4APQ8TEL6 797 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 TWIST2Q8WVJ9 160 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 PIH1D2Q8WWB5 315 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 FUBP1Q96AE4 644 aaKnown RBP15.56■□□□□ 0.08
MKS1-204ENST00000537529 LINGO1Q96FE5 620 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 BEGAINQ9BUH8 593 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 KIAA1522Q9P206 1035 aaPredicted RBP15.56■□□□□ 0.08
MKS1-204ENST00000537529 PCDHB1Q9Y5F3 818 aa15.56■□□□□ 0.08
MKS1-204ENST00000537529 KLK8O60259 260 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 SOCS5O75159 536 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 RPS17P08708 135 aaKnown RBP15.55■□□□□ 0.08
MKS1-204ENST00000537529 CHRM3P20309 590 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 CLCQ05315 142 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 MMEL1Q495T6 779 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 CYHR1Q6ZMK1 362 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 KBTBD6Q86V97 674 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 CAMK1DQ8IU85 385 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 BBS7Q8IWZ6 715 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 PAF1Q8N7H5 531 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 NSUN5Q96P11 429 aaKnown RBP15.55■□□□□ 0.08
MKS1-204ENST00000537529 SLC30A3Q99726 388 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 C19orf43Q9BQ61 176 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 SLC25A23Q9BV35 468 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 MRPL40Q9NQ50 206 aaKnown RBP15.55■□□□□ 0.08
MKS1-204ENST00000537529 GALPQ9UBC7 116 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 EVLQ9UI08 416 aaPredicted RBP15.55■□□□□ 0.08
MKS1-204ENST00000537529 DNAJC15Q9Y5T4 150 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 CRCPO75575 148 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 BAIAP3O94812 1187 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 TSPAN12O95859 305 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 IGSF6O95976 241 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 SNRPB2P08579 225 aaKnown RBP15.55■□□□□ 0.08
MKS1-204ENST00000537529 ARSAP15289 507 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 RAG1P15918 1043 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 ME2P23368 584 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 LMAN2Q12907 356 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 BLMHQ13867 455 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 FLOT2Q14254 428 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 REP15Q6BDI9 236 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 IZUMO2Q6UXV1 221 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 KBTBD2Q8IY47 623 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 HMGCLL1Q8TB92 370 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 C1QTNF3Q9BXJ4 246 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 LRRC3Q9BY71 257 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 P2RY12Q9H244 342 aa15.55■□□□□ 0.08
MKS1-204ENST00000537529 OBSL1O75147 1896 aa15.54■□□□□ 0.08
MKS1-204ENST00000537529 PRMT5O14744 637 aaPredicted RBP15.54■□□□□ 0.08
MKS1-204ENST00000537529 PIP5K1BO14986 540 aa15.54■□□□□ 0.08
MKS1-204ENST00000537529 SMAD6O43541 496 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms