RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 HARS2P49590 506 aaKnown RBP3.71□□□□□ -1.82
MCF2-210ENST00000536274 LIG4P49917 911 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 MAP2K6P52564 334 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 ARFIP1P53367 373 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 AP2S1P53680 142 aaPredicted RBP3.71□□□□□ -1.82
MCF2-210ENST00000536274 TMBIM6P55061 237 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 RPL7AP62424 266 aaKnown RBP3.71□□□□□ -1.82
MCF2-210ENST00000536274 PPP3CAQ08209 521 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 PCLAFQ15004 111 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 ALX1Q15699 326 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 CCDC142Q17RM4 750 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 FUT11Q495W5 492 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 CYBRD1Q53TN4 286 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 ZMAT1Q5H9K5 638 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 TBCELQ5QJ74 424 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 ABRAXAS1Q6UWZ7 409 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.71□□□□□ -1.82
MCF2-210ENST00000536274 C16orf62Q7Z3J2 963 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 CMC1Q7Z7K0 106 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 NOXA1Q86UR1 476 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 CDR2LQ86X02 465 aaPredicted RBP3.71□□□□□ -1.82
MCF2-210ENST00000536274 TIGD4Q8IY51 512 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 ANKRD53Q8N9V6 530 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 NETO2Q8NC67 525 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 SMG8Q8ND04 991 aaKnown RBP3.71□□□□□ -1.82
MCF2-210ENST00000536274 PJA1Q8NG27 643 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 OR8H1Q8NGG4 311 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 OR9I1Q8NGQ6 314 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 RAB2BQ8WUD1 216 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 SHC3Q92529 594 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 HAS1Q92839 578 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 KREMEN1Q96MU8 473 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 GAS2L1Q99501 681 aaPredicted RBP3.71□□□□□ -1.82
MCF2-210ENST00000536274 VAT1Q99536 393 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 SEPHS2Q99611 448 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 GDF15Q99988 308 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 C11orf70Q9BRQ4 267 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 EFHD1Q9BUP0 239 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.71□□□□□ -1.82
MCF2-210ENST00000536274 DPEP3Q9H4B8 488 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 PLAC1Q9HBJ0 212 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 STARD7Q9NQZ5 370 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 SNX15Q9NRS6 342 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 TOPORSQ9NS56 1045 aaPredicted RBP3.71□□□□□ -1.82
MCF2-210ENST00000536274 PAK1IP1Q9NWT1 392 aaPredicted RBP3.71□□□□□ -1.82
MCF2-210ENST00000536274 MAD2L2Q9UI95 211 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 ZNF112Q9UJU3 913 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 FAM181BA6NEQ2 426 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 ADM5C9JUS6 153 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 PDPK1O15530 556 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 NOBOXO60393 691 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 PLATP00750 562 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 KRT1P04264 644 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 FHP07954 510 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 FBXO45P0C2W1 286 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 CHRM3P20309 590 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 CCNCP24863 283 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 MAPK1P28482 360 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 GGT5P36269 586 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 SP3Q02447 781 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 COX10Q12887 443 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 GALEQ14376 348 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 MFSD13AQ14CX5 517 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 TBCCQ15814 346 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 GRIK4Q16099 956 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 ANGEL2Q5VTE6 544 aaKnown RBP3.71□□□□□ -1.82
MCF2-210ENST00000536274 GARNL3Q5VVW2 1013 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 SLX4IPQ5VYV7 408 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 ZFP1Q6P2D0 407 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 ZNF354CQ86Y25 554 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 NT5DC4Q86YG4 428 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 CLEC10AQ8IUN9 316 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 RELL1Q8IUW5 271 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 BBS7Q8IWZ6 715 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 TAGAPQ8N103 731 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 FAM160A2Q8N612 972 aaPredicted RBP3.71□□□□□ -1.82
MCF2-210ENST00000536274 CCDC185Q8N715 623 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 SIMC1Q8NDZ2 872 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 OR52H1Q8NGJ2 320 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 SEPT1Q8WYJ6 367 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 PROX1Q92786 737 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 REXO5Q96IC2 774 aaKnown RBP3.71□□□□□ -1.82
MCF2-210ENST00000536274 SNX18Q96RF0 628 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 LPIN3Q9BQK8 851 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 ING2Q9H160 280 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 ZCCHC4Q9H5U6 513 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 ASB7Q9H672 318 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 RANBP3Q9H6Z4 567 aaPredicted RBP3.71□□□□□ -1.82
MCF2-210ENST00000536274 GPN2Q9H9Y4 310 aaPredicted RBP3.71□□□□□ -1.82
MCF2-210ENST00000536274 SP110Q9HB58 689 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 INTS7Q9NVH2 962 aaKnown RBP3.71□□□□□ -1.82
MCF2-210ENST00000536274 SIRT5Q9NXA8 310 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 DCAF16Q9NXF7 216 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 KCTD5Q9NXV2 234 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 MTMR4Q9NYA4 1195 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 ADGRE2Q9UHX3 823 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 AGO1Q9UL18 857 aaKnown RBP3.71□□□□□ -1.82
MCF2-210ENST00000536274 HSPB11Q9Y547 144 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 CSADQ9Y600 493 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 U3KQV3 271 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms