RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 PDHA1P08559 390 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 GPR89BP0CG08 455 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 ACP5P13686 325 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 TCF4P15884 667 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 CD1CP29017 333 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 TSPAN7P41732 249 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 CD86P42081 329 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 CCR10P46092 362 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 EPHA4P54764 986 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 PTSQ03393 145 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 SEPT6Q14141 434 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 KIR2DS5Q14953 304 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 INSCQ1MX18 579 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 NKAIN2Q5VXU1 208 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 KCTD16Q68DU8 428 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 BORAQ6PGQ7 559 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 TRIM74Q86UV6 250 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 LUZP1Q86V48 1076 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 C17orf82Q86X59 251 aaPredicted RBP13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 NRROSQ86YC3 692 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 CACNA2D3Q8IZS8 1091 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 JPH3Q8WXH2 748 aaPredicted RBP13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 CCDC42Q96M95 316 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 ZSCAN5AQ9BUG6 496 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 GPR63Q9BZJ6 419 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 BRD8Q9H0E9 1235 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 ZFYVE1Q9HBF4 777 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 CBX8Q9HC52 389 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 SARS2Q9NP81 518 aaKnown RBP13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 FOXJ2Q9P0K8 574 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 IFNKQ9P0W0 207 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 A8MU76 341 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 PDZK1P1A8MUH7 402 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 ANKRD66B4E2M5 251 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 CASC3O15234 703 aaKnown RBP13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 GRID2O43424 1007 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 FZD6O60353 706 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 VIPP01282 170 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 JCHAINP01591 159 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 THRAP10827 490 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 F3P13726 295 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 AMD1P17707 334 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 GM2AP17900 193 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 MPSTP25325 297 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 MAP4P27816 1152 aaKnown RBP13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 ETV5P41161 510 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 SPINT3P49223 89 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 NFATC2Q13469 925 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 MESDQ14696 234 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 IQCB1Q15051 598 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 SLC18A3Q16572 532 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 HGSNATQ68CP4 663 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 PDPK2PQ6A1A2 396 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 TXNRD3NBQ6F5E7 133 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 WDR74Q6RFH5 385 aaPredicted RBP13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 NYAP1Q6ZVC0 841 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 NT5DC3Q86UY8 548 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 RHOT2Q8IXI1 618 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 NLGN4XQ8N0W4 816 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 SFRP1Q8N474 314 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 NLGN4YQ8NFZ3 816 aaPredicted RBP13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 GDAP1Q8TB36 358 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 SLC37A2Q8TED4 501 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 MAML1Q92585 1016 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 ZCCHC2Q9C0B9 1178 aaKnown RBP13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 CARD9Q9H257 536 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 ADNPQ9H2P0 1102 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 GPN2Q9H9Y4 310 aaPredicted RBP13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 KLHL3Q9UH77 587 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 PCDHB3Q9Y5E6 796 aa13.13□□□□□ -0.31
CLSTN3-205ENST00000535452 CELSR3Q9NYQ7 3312 aa13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 LRRK1Q38SD2 2015 aa13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 POLR1CO15160 346 aaPredicted RBP13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 PPM1DO15297 605 aa13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 RAD1O60671 282 aa13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 ZIC2O95409 532 aaPredicted RBP13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 ATP1A1P05023 1023 aaKnown RBP13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 HLA-DQB2P05538 268 aa13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 CD48P09326 243 aa13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 CCL4P13236 92 aa13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 CASP14P31944 242 aa13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 ARHGAP25P42331 645 aa13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 HALP42357 657 aa13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 SQSTM1Q13501 440 aa13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 PCSK7Q16549 785 aa13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 ZDHHC20Q5W0Z9 365 aa13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 ALS2CLQ60I27 953 aa13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 ALG1LQ6GMV1 187 aa13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 PCSK4Q6UW60 755 aa13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 RFX6Q8HWS3 928 aa13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 SFTPA2Q8IWL1 248 aa13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 PELI3Q8N2H9 469 aa13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 CBARPQ8N350 705 aaPredicted RBP13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 OR8K1Q8NGG5 319 aa13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 FAM71BQ8TC56 605 aa13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 PATE1Q8WXA2 126 aa13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 LRRC45Q96CN5 670 aa13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 SCARF2Q96GP6 870 aaPredicted RBP13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 LYSMD1Q96S90 227 aa13.12□□□□□ -0.31
CLSTN3-205ENST00000535452 LUC7LQ9NQ29 371 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms