RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 A0A1W2PQM1 296 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 GOLGA6CA6NDK9 693 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 GOLGA6BA6NDN3 693 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 MIF4GDA9UHW6 222 aaKnown RBP10.31□□□□□ -0.76
CSDE1-217ENST00000534699 PDHA1P08559 390 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 ANKRD34CP0C6C1 535 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 GOLGA6DP0CG33 693 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 LIPCP11150 499 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 XRCC1P18887 633 aaPredicted RBP10.31□□□□□ -0.76
CSDE1-217ENST00000534699 CTNNA1P35221 906 aaKnown RBP10.31□□□□□ -0.76
CSDE1-217ENST00000534699 CD86P42081 329 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 GNPDA1P46926 289 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 LIMK2P53671 638 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 CTBSQ01459 385 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 SEMG2Q02383 582 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 DMPKQ09013 629 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 AP1B1Q10567 949 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 TMEM71Q6P5X7 295 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 PHYKPLQ8IUZ5 450 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 OR10G6Q8NH81 332 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 TAAR9Q96RI9 348 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 RIOK2Q9BVS4 552 aaKnown RBP10.31□□□□□ -0.76
CSDE1-217ENST00000534699 LGR4Q9BXB1 951 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 RAB33BQ9H082 229 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 GOLGA6AQ9NYA3 693 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 CNOT6Q9ULM6 557 aaKnown RBP10.31□□□□□ -0.76
CSDE1-217ENST00000534699 AAR2Q9Y312 384 aaKnown RBP10.31□□□□□ -0.76
CSDE1-217ENST00000534699 ZNF711Q9Y462 761 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 ADGRG1Q9Y653 693 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 DCHS1Q96JQ0 3298 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 VPS13AQ96RL7 3174 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 PTPN3P26045 913 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 HMGCLP35914 325 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 ATP1A2P50993 1020 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 PDX1P52945 283 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 ITGA9Q13797 1035 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 PRPSAP1Q14558 356 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 LDLRAP1Q5SW96 308 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 ARMC3Q5W041 872 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 TSPAN33Q86UF1 283 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 SFRP1Q8N474 314 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 HNRNPLLQ8WVV9 542 aaKnown RBP10.3□□□□□ -0.76
CSDE1-217ENST00000534699 WDR24Q96S15 920 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.3□□□□□ -0.76
CSDE1-217ENST00000534699 EPN1Q9Y6I3 576 aaPredicted RBP10.3□□□□□ -0.76
CSDE1-217ENST00000534699 EIF4E1BA6NMX2 242 aaKnown RBP10.3□□□□□ -0.76
CSDE1-217ENST00000534699 GOLGA6L6A8MZA4 724 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 DUX1O43812 170 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 ITGB2P05107 769 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 CTPS1P17812 591 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 GJC1P36383 396 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 NOP2P46087 812 aaKnown RBP10.3□□□□□ -0.76
CSDE1-217ENST00000534699 BIRC2Q13490 618 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 CRTC2Q53ET0 693 aaPredicted RBP10.3□□□□□ -0.76
CSDE1-217ENST00000534699 SOWAHCQ53LP3 525 aaPredicted RBP10.3□□□□□ -0.76
CSDE1-217ENST00000534699 KDELC1Q6UW63 502 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 BPHLQ86WA6 291 aaPredicted RBP10.3□□□□□ -0.76
CSDE1-217ENST00000534699 NETO2Q8NC67 525 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 GLYATL1Q969I3 302 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 ASPSCR1Q9BZE9 553 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 SPATS2LQ9NUQ6 558 aaKnown RBP10.3□□□□□ -0.76
CSDE1-217ENST00000534699 SPTLC3Q9NUV7 552 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 HEY1Q9Y5J3 304 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 PRR19A6NJB7 356 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 B4DGG1 531 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 K7ENP7 123 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 TNFSF15O95150 251 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 CLDN7O95471 211 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 CELA2BP08218 269 aaPredicted RBP10.3□□□□□ -0.76
CSDE1-217ENST00000534699 JMJD7P0C870 316 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 ZNF75DP51815 510 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 ZBTB17Q13105 803 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 LAMB3Q13751 1172 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 GTF2H3Q13889 308 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 NOMO1Q15155 1222 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 C3orf38Q5JPI3 329 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 INO80CQ6PI98 192 aaPredicted RBP10.3□□□□□ -0.76
CSDE1-217ENST00000534699 MFSD7Q6UXD7 560 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 ZSCAN1Q8NBB4 408 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 AGBL5Q8NDL9 886 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 FCRL4Q96PJ5 515 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 GPR63Q9BZJ6 419 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 EPB41L5Q9HCM4 733 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 SIRPGQ9P1W8 387 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 MOSPD1Q9UJG1 213 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 LOXL2Q9Y4K0 774 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 USP24Q9UPU5 2620 aa10.3□□□□□ -0.76
CSDE1-217ENST00000534699 A6NCN8 305 aa10.29□□□□□ -0.76
CSDE1-217ENST00000534699 GRID2O43424 1007 aa10.29□□□□□ -0.76
CSDE1-217ENST00000534699 CST8O60676 142 aa10.29□□□□□ -0.76
CSDE1-217ENST00000534699 NDUFA10O95299 355 aa10.29□□□□□ -0.76
CSDE1-217ENST00000534699 MPOP05164 745 aa10.29□□□□□ -0.76
CSDE1-217ENST00000534699 F3P13726 295 aa10.29□□□□□ -0.76
CSDE1-217ENST00000534699 ACTR1BP42025 376 aa10.29□□□□□ -0.76
CSDE1-217ENST00000534699 ACTR1AP61163 376 aa10.29□□□□□ -0.76
CSDE1-217ENST00000534699 IYDQ6PHW0 289 aa10.29□□□□□ -0.76
CSDE1-217ENST00000534699 C19orf48Q6RUI8 117 aa10.29□□□□□ -0.76
CSDE1-217ENST00000534699 ABRAXAS1Q6UWZ7 409 aa10.29□□□□□ -0.76
CSDE1-217ENST00000534699 LRRTM4Q86VH4 590 aa10.29□□□□□ -0.76
CSDE1-217ENST00000534699 NAGSQ8N159 534 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms