RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 GFM2Q969S9 779 aaKnown RBP3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 FUBP1Q96AE4 644 aaKnown RBP3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 TTC17Q96AE7 1141 aa3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 CCDC127Q96BQ5 260 aa3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 C19orf60Q96EN9 201 aa3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 ANKRD36BP1Q96IX9 119 aa3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 TWNKQ96RR1 684 aa3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 DHRS4Q9BTZ2 278 aa3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 TIPINQ9BVW5 301 aa3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 STRA6Q9BX79 667 aa3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 BRINP2Q9C0B6 783 aa3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 CLPBQ9H078 707 aa3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 ADNPQ9H2P0 1102 aa3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 PARVGQ9HBI0 331 aa3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 SMURF1Q9HCE7 757 aa3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 DMAP1Q9NPF5 467 aaPredicted RBP3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 TLR8Q9NR97 1041 aaKnown RBP3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 DONSONQ9NYP3 566 aa3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 SEPT10Q9P0V9 454 aa3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 LUZP4Q9P127 313 aa3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 KCNG1Q9UIX4 513 aa3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 ERRFI1Q9UJM3 462 aaPredicted RBP3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 PADI4Q9UM07 663 aa3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 VPS4AQ9UN37 437 aa3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 ERVW-1Q9UQF0 538 aa3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 SCML2Q9UQR0 700 aa3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 TP53TG5Q9Y2B4 290 aa3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 TMEM131Q92545 1883 aa3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 ABCA2Q9BZC7 2435 aa3.04□□□□□ -1.92
CHMP4A-208ENST00000534106 LOC101059948A0A1B0GTJ6 334 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 UBE2QL1A1L167 161 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 TARSL2A2RTX5 802 aaKnown RBP3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 NEMP2A6NFY4 417 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 TCP11X1B4DZS4 312 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 H0YCG3 227 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 MASP2O00187 686 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 TULP2O00295 520 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 CLIC2O15247 247 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 AQP9O43315 295 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 MSI1O43347 362 aaKnown RBP3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 PLRG1O43660 514 aaKnown RBP3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 KRT86O43790 486 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 DNAJC6O75061 913 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 TBCAO75347 108 aaKnown RBP3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 ASMTLO95671 621 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 ABHD16AO95870 558 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 PAK4O96013 591 aaPredicted RBP3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 TNNC2P02585 160 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 CSF2P04141 144 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 ATP5BP06576 529 aaKnown RBP3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 FAM153BP0C7A2 387 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 JMJD7P0C870 316 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 ALPPL2P10696 532 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 RALAP11233 206 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 C5AR1P21730 350 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 OAS2P29728 719 aaKnown RBP3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 HOXD13P35453 343 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 HARS2P49590 506 aaKnown RBP3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 NDST1P52848 882 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 ST8SIA6P61647 398 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 RPS24P62847 133 aaKnown RBP3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 TNNC1P63316 161 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 COG7P83436 770 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 GOLGA8FQ08AF8 430 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 GOLGA8DPQ0D2H9 430 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 KLRB1Q12918 225 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 SQSTM1Q13501 440 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 TRIM29Q14134 588 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 SPIDRQ14159 915 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 C16orf72Q14CZ0 275 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 KRTAP21-3Q3LHN1 58 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 NADK2Q4G0N4 442 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 LACTB2Q53H82 288 aaPredicted RBP3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 RABL3Q5HYI8 236 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 FAM209AQ5JX71 171 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 FKBP15Q5T1M5 1219 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 PIK3R6Q5UE93 754 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 KCTD16Q68DU8 428 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 SP5Q6BEB4 398 aaPredicted RBP3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 NADSYN1Q6IA69 706 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 SPOPLQ6IQ16 392 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 ZCCHC8Q6NZY4 707 aaKnown RBP3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 Q6ZPA2 131 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 PTAR1Q7Z6K3 402 aaPredicted RBP3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 DSG4Q86SJ6 1040 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 MRGPREQ86SM8 312 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 TMEM135Q86UB9 458 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 IQCHQ86VS3 1027 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 HEATR4Q86WZ0 1026 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 VRK3Q8IV63 474 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 FAM217AQ8IXS0 508 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 ELOA2Q8IYF1 753 aaPredicted RBP3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 SYCP3Q8IZU3 236 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 AHI1Q8N157 1196 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 CARNMT1Q8N4J0 409 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 TEX19Q8NA77 164 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 CPT1CQ8TCG5 803 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 RAD54LQ92698 747 aa3.03□□□□□ -1.92
CHMP4A-208ENST00000534106 SMARCD1Q96GM5 515 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms