RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	LRIG3	Q6UXM1	1119 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	OTOA	Q7RTW8	1153 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	NLRP14	Q86W24	1093 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	ADGRF3	Q8IZF5	1079 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	ENDOV	Q8N8Q3	282 aa	Known RBP	4.74	□□□□□ -1.65
ATM-223	ENST00000533979	XXYLT1	Q8NBI6	393 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	C11orf65	Q8NCR3	313 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	PSPC1	Q8WXF1	523 aa	Known RBP	4.74	□□□□□ -1.65
ATM-223	ENST00000533979	MMAB	Q96EY8	250 aa	Predicted RBP	4.74	□□□□□ -1.65
ATM-223	ENST00000533979	CCDC114	Q96M63	670 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	AK8	Q96MA6	479 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	CFAP57	Q96MR6	1250 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	FSD1	Q9BTV5	496 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	HDHD5	Q9BXW7	423 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	GLIS2	Q9BZE0	524 aa	Predicted RBP	4.74	□□□□□ -1.65
ATM-223	ENST00000533979	FAM129A	Q9BZQ8	928 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	TSPY26P	Q9H489	355 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	SPAG4	Q9NPE6	437 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	MBNL1	Q9NR56	388 aa	Known RBP	4.74	□□□□□ -1.65
ATM-223	ENST00000533979	DDX43	Q9NXZ2	648 aa	Known RBP	4.74	□□□□□ -1.65
ATM-223	ENST00000533979	XPO7	Q9UIA9	1087 aa	Known RBP	4.74	□□□□□ -1.65
ATM-223	ENST00000533979	OSGIN1	Q9UJX0	560 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	TNFSF13B	Q9Y275	285 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	KLHL20	Q9Y2M5	609 aa		4.74	□□□□□ -1.65
ATM-223	ENST00000533979	TCRBV21S2A2	A0A5A6	115 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	GAGE12J	A6NER3	117 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	LRRC53	A6NM62	1247 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	C17orf100	A8MU93	164 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	SNAP23	O00161	211 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	CAPN9	O14815	690 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	ZBTB14	O43829	449 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	CEP104	O60308	925 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	IPO7	O95373	1038 aa	Known RBP	4.73	□□□□□ -1.65
ATM-223	ENST00000533979	TPO	P07202	933 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	ALDOC	P09972	364 aa	Known RBP	4.73	□□□□□ -1.65
ATM-223	ENST00000533979	CHRNB1	P11230	501 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	CD72	P21854	359 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	CDC25A	P30304	524 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	HOXA13	P31271	388 aa	Predicted RBP	4.73	□□□□□ -1.65
ATM-223	ENST00000533979	FMO4	P31512	558 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	GJC1	P36383	396 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	KCNJ4	P48050	445 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	HTR6	P50406	440 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	ADPRH	P54922	357 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	IL13RA2	Q14627	380 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	LASP1	Q14847	261 aa	Known RBP	4.73	□□□□□ -1.65
ATM-223	ENST00000533979	HYAL4	Q2M3T9	481 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	SMU1	Q2TAY7	513 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	AP5B1	Q2VPB7	878 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	ARMC4	Q5T2S8	1044 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	CST9LP1	Q5W188	147 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	ATG9B	Q674R7	924 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.73	□□□□□ -1.65
ATM-223	ENST00000533979	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.73	□□□□□ -1.65
ATM-223	ENST00000533979	CYB5R4	Q7L1T6	521 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	MCM10	Q7L590	875 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	TADA2B	Q86TJ2	420 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	DDIAS	Q8IXT1	998 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	TMEM199	Q8N511	208 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	B4GALNT2	Q8NHY0	566 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	SEPT1	Q8WYJ6	367 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	TAF4B	Q92750	862 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	GTF3C6	Q969F1	213 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	EME1	Q96AY2	570 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	THOC3	Q96J01	351 aa	Known RBP	4.73	□□□□□ -1.65
ATM-223	ENST00000533979	DACH2	Q96NX9	599 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	TMEM237	Q96Q45	408 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	PAFAH2	Q99487	392 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	NTPCR	Q9BSD7	190 aa	Known RBP	4.73	□□□□□ -1.65
ATM-223	ENST00000533979	CCDC106	Q9BWC9	280 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	MID1IP1	Q9NPA3	183 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	SNTG1	Q9NSN8	517 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	SIRT3	Q9NTG7	399 aa	Predicted RBP	4.73	□□□□□ -1.65
ATM-223	ENST00000533979	OGFR	Q9NZT2	677 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	TBK1	Q9UHD2	729 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	LIPT1	Q9Y234	373 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	ATP10B	O94823	1461 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	PLA2R1	Q13018	1463 aa		4.73	□□□□□ -1.65
ATM-223	ENST00000533979	C9orf84	Q5VXU9	1444 aa		4.72	□□□□□ -1.65
ATM-223	ENST00000533979		A6NNC1	897 aa		4.72	□□□□□ -1.65
ATM-223	ENST00000533979	FOXO6	A8MYZ6	492 aa		4.72	□□□□□ -1.65
ATM-223	ENST00000533979	RHOD	O00212	210 aa		4.72	□□□□□ -1.65
ATM-223	ENST00000533979	ASAP2	O43150	1006 aa		4.72	□□□□□ -1.65
ATM-223	ENST00000533979	HBP1	O60381	514 aa		4.72	□□□□□ -1.65
ATM-223	ENST00000533979	CCNT1	O60563	726 aa	Known RBP	4.72	□□□□□ -1.65
ATM-223	ENST00000533979	DIAPH2	O60879	1101 aa		4.72	□□□□□ -1.65
ATM-223	ENST00000533979	SEC22B	O75396	215 aa		4.72	□□□□□ -1.65
ATM-223	ENST00000533979	KLKB1	P03952	638 aa		4.72	□□□□□ -1.65
ATM-223	ENST00000533979	FYN	P06241	537 aa		4.72	□□□□□ -1.65
ATM-223	ENST00000533979	SUPT20HL2	P0C7V6	817 aa		4.72	□□□□□ -1.65
ATM-223	ENST00000533979	PC	P11498	1178 aa	Known RBP	4.72	□□□□□ -1.65
ATM-223	ENST00000533979	HOXB2	P14652	356 aa		4.72	□□□□□ -1.65
ATM-223	ENST00000533979	GAP43	P17677	238 aa		4.72	□□□□□ -1.65
ATM-223	ENST00000533979	TRIM21	P19474	475 aa	Known RBP	4.72	□□□□□ -1.65
ATM-223	ENST00000533979	AMPH	P49418	695 aa		4.72	□□□□□ -1.65
ATM-223	ENST00000533979	CAMP	P49913	170 aa		4.72	□□□□□ -1.65
ATM-223	ENST00000533979	PNLIPRP2	P54317	469 aa		4.72	□□□□□ -1.65
ATM-223	ENST00000533979	P2RX3	P56373	397 aa		4.72	□□□□□ -1.65
ATM-223	ENST00000533979	YBEY	P58557	167 aa	Predicted RBP	4.72	□□□□□ -1.65
ATM-223	ENST00000533979	SCN1B	Q07699	218 aa		4.72	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms