RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, human

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-208	ENST00000533897	LTBP2	Q14767	1821 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	STX16	O14662	325 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	AREL1	O15033	823 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	COQ9	O75208	318 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	SERPINB7	O75635	380 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	ZBTB7A	O95365	584 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	ZDHHC11B	P0C7U3	371 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	NELFE	P18615	380 aa	Known RBP	4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	PRDX3	P30048	256 aa	Known RBP	4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	PSEN2	P49810	448 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	GSK3B	P49841	420 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	GALK1	P51570	392 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	ADAR	P55265	1226 aa	Known RBP	4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	EEFSEC	P57772	596 aa	Known RBP	4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	RAB15	P59190	212 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	GSTM4	Q03013	218 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	SPIDR	Q14159	915 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	CTF1	Q16619	201 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	FAM83E	Q2M2I3	478 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	TRIM71	Q2Q1W2	868 aa	Known RBP	4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	ARL13B	Q3SXY8	428 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	MS4A13	Q5J8X5	152 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	FGD3	Q5JSP0	725 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	LAIR1	Q6GTX8	287 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	NADSYN1	Q6IA69	706 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	TIGD7	Q6NT04	549 aa	Predicted RBP	4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	ITIH5	Q86UX2	942 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	CALHM3	Q86XJ0	350 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	SPPL2C	Q8IUH8	684 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	HDAC10	Q969S8	669 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	EME1	Q96AY2	570 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	ASB2	Q96Q27	587 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	AARSD1	Q9BTE6	412 aa	Known RBP	4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	ZBED2	Q9BTP6	218 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	OAZ3	Q9UMX2	235 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	SCML2	Q9UQR0	700 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	CLEC11A	Q9Y240	323 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	PCDHB3	Q9Y5E6	796 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	DHRS12	A0PJE2	317 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897		F8W810	466 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	XPOT	O43592	962 aa	Known RBP	4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	SNAP91	O60641	907 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	SIX3	O95343	332 aa	Predicted RBP	4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	EPO	P01588	193 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	MBL2	P11226	248 aa	Predicted RBP	4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	IDO1	P14902	403 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	IL1RN	P18510	177 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	TCN1	P20061	433 aa	Predicted RBP	4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	CRHBP	P24387	322 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	CAPG	P40121	348 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	SERPINH1	P50454	418 aa	Known RBP	4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	SCNN1B	P51168	640 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	STC1	P52823	247 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	ATXN3	P54252	364 aa	Predicted RBP	4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	TMBIM6	P55061	237 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	DIO3	P55073	304 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	AQP6	Q13520	282 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	SELPLG	Q14242	412 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	PRPSAP1	Q14558	356 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	CTU2	Q2VPK5	515 aa	Known RBP	4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	ZNF829	Q3KNS6	432 aa	Predicted RBP	4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	VPS26B	Q4G0F5	336 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	IQCC	Q4KMZ1	466 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	ALF	Q53S48	1182 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	AARS2	Q5JTZ9	985 aa	Known RBP	4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	CTSL3P	Q5NE16	218 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	UGT3A1	Q6NUS8	523 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	CYP2R1	Q6VVX0	501 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	DCDC5	Q6ZRR9	648 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	SYVN1	Q86TM6	617 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	ZFAND4	Q86XD8	727 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	CAMK1D	Q8IU85	385 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	IPMK	Q8NFU5	416 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	IGSF8	Q969P0	613 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	HMCES	Q96FZ2	354 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	AMBRA1	Q9C0C7	1298 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	P2RY12	Q9H244	342 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	CHST12	Q9NRB3	414 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	FAM105A	Q9NUU6	356 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	TMEFF2	Q9UIK5	374 aa	Predicted RBP	4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	SLC30A1	Q9Y6M5	507 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	PMF1-BGLAP	U3KQ54	211 aa		4.4	□□□□□ -1.71
CTSC-208	ENST00000533897	OR51F1	A6NGY5	319 aa		4.39	□□□□□ -1.71
CTSC-208	ENST00000533897	PDHX	O00330	501 aa		4.39	□□□□□ -1.71
CTSC-208	ENST00000533897	TXNDC9	O14530	226 aa		4.39	□□□□□ -1.71
CTSC-208	ENST00000533897	GAPDHS	O14556	408 aa	Predicted RBP	4.39	□□□□□ -1.71
CTSC-208	ENST00000533897	MSI1	O43347	362 aa	Known RBP	4.39	□□□□□ -1.71
CTSC-208	ENST00000533897	KPNA6	O60684	536 aa		4.39	□□□□□ -1.71
CTSC-208	ENST00000533897	SRP72	O76094	671 aa	Known RBP	4.39	□□□□□ -1.71
CTSC-208	ENST00000533897	CNTN5	O94779	1100 aa		4.39	□□□□□ -1.71
CTSC-208	ENST00000533897	CD160	O95971	181 aa		4.39	□□□□□ -1.71
CTSC-208	ENST00000533897	C1R	P00736	705 aa		4.39	□□□□□ -1.71
CTSC-208	ENST00000533897	HPR	P00739	348 aa		4.39	□□□□□ -1.71
CTSC-208	ENST00000533897	FUCA1	P04066	466 aa		4.39	□□□□□ -1.71
CTSC-208	ENST00000533897	ENO2	P09104	434 aa	Predicted RBP	4.39	□□□□□ -1.71
CTSC-208	ENST00000533897	UMPS	P11172	480 aa		4.39	□□□□□ -1.71
CTSC-208	ENST00000533897	OGN	P20774	298 aa	Known RBP	4.39	□□□□□ -1.71
CTSC-208	ENST00000533897	HOXD9	P28356	352 aa	Predicted RBP	4.39	□□□□□ -1.71
CTSC-208	ENST00000533897	NRIP1	P48552	1158 aa		4.39	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms