RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 NR2C2P49116 596 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 ERVPABLB-1P60509 514 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 CXADRP78310 365 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 TLE3Q04726 772 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 ADCY2Q08462 1091 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 PEX6Q13608 980 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 PYCR3Q53H96 274 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 TEX44Q53QW1 395 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 ZNF569Q5MCW4 686 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 ZNF648Q5T619 568 aaPredicted RBP10.36□□□□□ -0.75
CAPN1-225ENST00000533704 HENMT1Q5T8I9 393 aaKnown RBP10.36□□□□□ -0.75
CAPN1-225ENST00000533704 BROXQ5VW32 411 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 C11orf63Q6NUN7 778 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 USP53Q70EK8 1073 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 CHST15Q7LFX5 561 aaPredicted RBP10.36□□□□□ -0.75
CAPN1-225ENST00000533704 NLRP8Q86W28 1048 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 ZNF761Q86XN6 746 aaPredicted RBP10.36□□□□□ -0.75
CAPN1-225ENST00000533704 TMTC1Q8IUR5 882 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 RCOR2Q8IZ40 523 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 NAGSQ8N159 534 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 SLC25A41Q8N5S1 370 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 LIN37Q96GY3 246 aaPredicted RBP10.36□□□□□ -0.75
CAPN1-225ENST00000533704 MRFAP1L1Q96HT8 127 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 COX14Q96I36 57 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 RBM41Q96IZ5 413 aaKnown RBP10.36□□□□□ -0.75
CAPN1-225ENST00000533704 TEKT5Q96M29 485 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 SLC46A1Q96NT5 459 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 PANX2Q96RD6 677 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 TRIB3Q96RU7 358 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 WDR24Q96S15 920 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 RDH14Q9HBH5 336 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 PISDQ9UG56 409 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 APPL1Q9UKG1 709 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 KCNK6Q9Y257 313 aa10.36□□□□□ -0.75
CAPN1-225ENST00000533704 RCCD1A6NED2 376 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 EIF4E1BA6NMX2 242 aaKnown RBP10.35□□□□□ -0.75
CAPN1-225ENST00000533704 H7C0C1 242 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 B4GAT1O43505 415 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 SLC25A14O95258 325 aaPredicted RBP10.35□□□□□ -0.75
CAPN1-225ENST00000533704 NDST3O95803 873 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 ACP5P13686 325 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 PNLIPP16233 465 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 UGT1A5P35504 534 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 ATP5OP48047 213 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 MAPK10P53779 464 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 WNT3AP56704 352 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 B4GALNT1Q00973 533 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 WASHC5Q12768 1159 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 NOMO1Q15155 1222 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 TAZQ16635 292 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 PLA2G4EQ3MJ16 856 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 NKAIN2Q5VXU1 208 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 CRTC3Q6UUV7 619 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 PID1Q7Z2X4 250 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 KIAA1328Q86T90 577 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 PIM3Q86V86 326 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 ACRBPQ8NEB7 543 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 IPMKQ8NFU5 416 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 SCARF2Q96GP6 870 aaPredicted RBP10.35□□□□□ -0.75
CAPN1-225ENST00000533704 PRR11Q96HE9 360 aaPredicted RBP10.35□□□□□ -0.75
CAPN1-225ENST00000533704 OR2AG1Q9H205 316 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 C10orf88Q9H8K7 445 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 CPNE5Q9HCH3 593 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 MAGEE1Q9HCI5 957 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 BPIFA1Q9NP55 256 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.35□□□□□ -0.75
CAPN1-225ENST00000533704 FAM153AQ9UHL3 310 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 CNOT6Q9ULM6 557 aaKnown RBP10.35□□□□□ -0.75
CAPN1-225ENST00000533704 LOXL2Q9Y4K0 774 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 PCDHGA8Q9Y5G5 932 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 SPO11Q9Y5K1 396 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 PCYT1BQ9Y5K3 369 aaPredicted RBP10.35□□□□□ -0.75
CAPN1-225ENST00000533704 DUSP10Q9Y6W6 482 aa10.35□□□□□ -0.75
CAPN1-225ENST00000533704 LAMA5O15230 3695 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 RGSL1A5PLK6 1076 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 AURKAO14965 403 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 PPM1DO15297 605 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 ZW10O43264 779 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 MTSS1O43312 755 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 GRID2O43424 1007 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 DNAJC6O75061 913 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 CPNE6O95741 557 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 EML2O95834 649 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 ITGA2BP08514 1039 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 ITIH1P19827 911 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 MPSTP25325 297 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 CTNNA2P26232 953 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 CCKBRP32239 447 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 CD68P34810 354 aaPredicted RBP10.34□□□□□ -0.75
CAPN1-225ENST00000533704 CHRNA4P43681 627 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 TMPRSS3P57727 454 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 EIF3IQ13347 325 aaKnown RBP10.34□□□□□ -0.75
CAPN1-225ENST00000533704 LRP8Q14114 963 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 SOWAHCQ53LP3 525 aaPredicted RBP10.34□□□□□ -0.75
CAPN1-225ENST00000533704 ARHGAP40Q5TG30 622 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 IGF2-ASQ6U949 168 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 RAD9BQ6WBX8 426 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 TMPRSS9Q7Z410 1059 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 TMC3Q7Z5M5 1100 aa10.34□□□□□ -0.75
CAPN1-225ENST00000533704 C17orf82Q86X59 251 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms