RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 ADARP55265 1226 aaKnown RBP28.28■■■□□ 2.12
SAMD1-202ENST00000533683 RCN1Q15293 331 aa28.28■■■□□ 2.12
SAMD1-202ENST00000533683 TSNQ15631 228 aaKnown RBP28.28■■■□□ 2.12
SAMD1-202ENST00000533683 RAB44Q7Z6P3 723 aaPredicted RBP28.28■■■□□ 2.12
SAMD1-202ENST00000533683 DEFB107AQ8IZN7 70 aa28.28■■■□□ 2.12
SAMD1-202ENST00000533683 GIMAP7Q8NHV1 300 aa28.28■■■□□ 2.12
SAMD1-202ENST00000533683 ATP13A3Q9H7F0 1226 aa28.28■■■□□ 2.12
SAMD1-202ENST00000533683 ZFYVE1Q9HBF4 777 aa28.28■■■□□ 2.12
SAMD1-202ENST00000533683 CDC7O00311 574 aa28.28■■■□□ 2.12
SAMD1-202ENST00000533683 TSPAN12O95859 305 aa28.28■■■□□ 2.12
SAMD1-202ENST00000533683 GFAPP14136 432 aa28.28■■■□□ 2.12
SAMD1-202ENST00000533683 CCNG1P51959 295 aa28.28■■■□□ 2.12
SAMD1-202ENST00000533683 EPHA5P54756 1037 aa28.28■■■□□ 2.12
SAMD1-202ENST00000533683 FPGSQ05932 587 aa28.28■■■□□ 2.12
SAMD1-202ENST00000533683 TEAD2Q15562 447 aa28.28■■■□□ 2.12
SAMD1-202ENST00000533683 TMEM240Q5SV17 173 aa28.28■■■□□ 2.12
SAMD1-202ENST00000533683 CLEC6AQ6EIG7 209 aa28.28■■■□□ 2.12
SAMD1-202ENST00000533683 PELI3Q8N2H9 469 aa28.28■■■□□ 2.12
SAMD1-202ENST00000533683 RP9Q8TA86 221 aaKnown RBP28.28■■■□□ 2.12
SAMD1-202ENST00000533683 CD200R1Q8TD46 325 aa28.28■■■□□ 2.12
SAMD1-202ENST00000533683 KCNJ9Q92806 393 aa28.28■■■□□ 2.12
SAMD1-202ENST00000533683 STMN2Q93045 179 aa28.28■■■□□ 2.12
SAMD1-202ENST00000533683 LBHD1Q9BQE6 289 aaPredicted RBP28.28■■■□□ 2.12
SAMD1-202ENST00000533683 ZBTB26Q9HCK0 441 aa28.28■■■□□ 2.12
SAMD1-202ENST00000533683 TRMT6Q9UJA5 497 aaKnown RBP28.28■■■□□ 2.12
SAMD1-202ENST00000533683 C1orf232A0A0U1RR37 186 aa28.27■■■□□ 2.12
SAMD1-202ENST00000533683 MOSPD3O75425 235 aa28.27■■■□□ 2.12
SAMD1-202ENST00000533683 SRCP12931 536 aa28.27■■■□□ 2.12
SAMD1-202ENST00000533683 HNF1BP35680 557 aa28.27■■■□□ 2.12
SAMD1-202ENST00000533683 INHBCP55103 352 aa28.27■■■□□ 2.12
SAMD1-202ENST00000533683 ACTR3P61158 418 aa28.27■■■□□ 2.12
SAMD1-202ENST00000533683 SH3BP2P78314 561 aa28.27■■■□□ 2.12
SAMD1-202ENST00000533683 C6orf163Q5TEZ5 329 aa28.27■■■□□ 2.12
SAMD1-202ENST00000533683 TMEM25Q86YD3 366 aa28.27■■■□□ 2.12
SAMD1-202ENST00000533683 PAF1Q8N7H5 531 aa28.27■■■□□ 2.12
SAMD1-202ENST00000533683 OR2AP1Q8NGE2 309 aa28.27■■■□□ 2.12
SAMD1-202ENST00000533683 POF1BQ8WVV4 589 aa28.27■■■□□ 2.12
SAMD1-202ENST00000533683 VOPP1Q96AW1 172 aa28.27■■■□□ 2.12
SAMD1-202ENST00000533683 P2RY12Q9H244 342 aa28.27■■■□□ 2.12
SAMD1-202ENST00000533683 SUPT3HB4E1H0 165 aa28.27■■■□□ 2.12
SAMD1-202ENST00000533683 GAPDHSO14556 408 aaPredicted RBP28.27■■■□□ 2.12
SAMD1-202ENST00000533683 SUPT3HO75486 399 aa28.27■■■□□ 2.12
SAMD1-202ENST00000533683 ESR1P03372 595 aa28.27■■■□□ 2.12
SAMD1-202ENST00000533683 ARSAP15289 507 aa28.27■■■□□ 2.12
SAMD1-202ENST00000533683 CDKN3Q16667 212 aa28.27■■■□□ 2.12
SAMD1-202ENST00000533683 C1orf146Q5VVC0 180 aa28.27■■■□□ 2.12
SAMD1-202ENST00000533683 PGM2L1Q6PCE3 622 aa28.27■■■□□ 2.12
SAMD1-202ENST00000533683 FUBP1Q96AE4 644 aaKnown RBP28.27■■■□□ 2.12
SAMD1-202ENST00000533683 PPP6CO00743 305 aa28.26■■■□□ 2.11
SAMD1-202ENST00000533683 ECI2O75521 394 aa28.26■■■□□ 2.11
SAMD1-202ENST00000533683 CHRM3P20309 590 aa28.26■■■□□ 2.11
SAMD1-202ENST00000533683 CYLC2Q14093 348 aaPredicted RBP28.26■■■□□ 2.11
SAMD1-202ENST00000533683 FAM151BQ6UXP7 276 aa28.26■■■□□ 2.11
SAMD1-202ENST00000533683 CHSY3Q70JA7 882 aa28.26■■■□□ 2.11
SAMD1-202ENST00000533683 ZSWIM9Q86XI8 627 aa28.26■■■□□ 2.11
SAMD1-202ENST00000533683 KIRREL3Q8IZU9 778 aa28.26■■■□□ 2.11
SAMD1-202ENST00000533683 STK40Q8N2I9 435 aa28.26■■■□□ 2.11
SAMD1-202ENST00000533683 SPPL3Q8TCT6 385 aa28.26■■■□□ 2.11
SAMD1-202ENST00000533683 COMMD10Q9Y6G5 202 aa28.26■■■□□ 2.11
SAMD1-202ENST00000533683 CHD7Q9P2D1 2997 aa28.26■■■□□ 2.11
SAMD1-202ENST00000533683 LAMA3Q16787 3333 aa28.26■■■□□ 2.11
SAMD1-202ENST00000533683 MYO7AQ13402 2215 aa28.26■■■□□ 2.11
SAMD1-202ENST00000533683 NPEPPSL1A6NEC2 478 aa28.26■■■□□ 2.11
SAMD1-202ENST00000533683 TLL1O43897 1013 aa28.26■■■□□ 2.11
SAMD1-202ENST00000533683 CDK14O94921 469 aa28.26■■■□□ 2.11
SAMD1-202ENST00000533683 CLDN7O95471 211 aa28.26■■■□□ 2.11
SAMD1-202ENST00000533683 GTF2A1P52655 376 aaPredicted RBP28.26■■■□□ 2.11
SAMD1-202ENST00000533683 EML3Q32P44 896 aa28.26■■■□□ 2.11
SAMD1-202ENST00000533683 FUT11Q495W5 492 aa28.26■■■□□ 2.11
SAMD1-202ENST00000533683 ASTLQ6HA08 431 aaPredicted RBP28.26■■■□□ 2.11
SAMD1-202ENST00000533683 CYHR1Q6ZMK1 362 aa28.26■■■□□ 2.11
SAMD1-202ENST00000533683 EEF1AKMT1Q8WVE0 214 aa28.26■■■□□ 2.11
SAMD1-202ENST00000533683 NSUN5Q96P11 429 aaKnown RBP28.26■■■□□ 2.11
SAMD1-202ENST00000533683 TMEM106CQ9BVX2 250 aa28.26■■■□□ 2.11
SAMD1-202ENST00000533683 CDH22Q9UJ99 828 aa28.26■■■□□ 2.11
SAMD1-202ENST00000533683 IQCF5A8MTL0 148 aa28.25■■■□□ 2.11
SAMD1-202ENST00000533683 BTN3A1O00481 513 aa28.25■■■□□ 2.11
SAMD1-202ENST00000533683 AIM2O14862 343 aa28.25■■■□□ 2.11
SAMD1-202ENST00000533683 CCNT2O60583 730 aaKnown RBP28.25■■■□□ 2.11
SAMD1-202ENST00000533683 PRAMEF1O95521 474 aa28.25■■■□□ 2.11
SAMD1-202ENST00000533683 PTPN2P17706 415 aa28.25■■■□□ 2.11
SAMD1-202ENST00000533683 PTDSS1P48651 473 aaKnown RBP28.25■■■□□ 2.11
SAMD1-202ENST00000533683 UGT3A2Q3SY77 523 aa28.25■■■□□ 2.11
SAMD1-202ENST00000533683 FBXO39Q8N4B4 442 aa28.25■■■□□ 2.11
SAMD1-202ENST00000533683 CFAP61Q8NHU2 1237 aa28.25■■■□□ 2.11
SAMD1-202ENST00000533683 ASB2Q96Q27 587 aa28.25■■■□□ 2.11
SAMD1-202ENST00000533683 TLR9Q9NR96 1032 aa28.25■■■□□ 2.11
SAMD1-202ENST00000533683 HS3ST2Q9Y278 367 aa28.25■■■□□ 2.11
SAMD1-202ENST00000533683 E5RI56 91 aa28.24■■■□□ 2.11
SAMD1-202ENST00000533683 CLASP2O75122 1294 aaKnown RBP28.24■■■□□ 2.11
SAMD1-202ENST00000533683 SERPINA4P29622 427 aa28.24■■■□□ 2.11
SAMD1-202ENST00000533683 CA5AP35218 305 aa28.24■■■□□ 2.11
SAMD1-202ENST00000533683 IL2P60568 153 aa28.24■■■□□ 2.11
SAMD1-202ENST00000533683 HERC3Q15034 1050 aa28.24■■■□□ 2.11
SAMD1-202ENST00000533683 PPP1R3AQ16821 1122 aa28.24■■■□□ 2.11
SAMD1-202ENST00000533683 SLC5A9Q2M3M2 681 aa28.24■■■□□ 2.11
SAMD1-202ENST00000533683 CERS6Q6ZMG9 384 aa28.24■■■□□ 2.11
SAMD1-202ENST00000533683 CCDC97Q96F63 343 aaPredicted RBP28.24■■■□□ 2.11
SAMD1-202ENST00000533683 CXorf51AA0A1B0GTR3 108 aa28.24■■■□□ 2.11
SAMD1-202ENST00000533683 CAPN8A6NHC0 703 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms