RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 PRAMEF10O60809 474 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 TNFP01375 233 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 FAM87AP0C7U9 286 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 SFTPCP11686 197 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 PNLIPP16233 465 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 CTPS1P17812 591 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 ITIH1P19827 911 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 CA4P22748 312 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 CD86P42081 329 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 LIG3P49916 1009 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 EIF3EP60228 445 aaKnown RBP8.69□□□□□ -1.02
COPB1-210ENST00000533533 NFKB2Q00653 900 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 OTUD4Q01804 1114 aaKnown RBP8.69□□□□□ -1.02
COPB1-210ENST00000533533 TRAF2Q12933 501 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 ZBTB17Q13105 803 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 MTM1Q13496 603 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 TAZQ16635 292 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 MANEAQ5SRI9 462 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 CERCAMQ5T4B2 595 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 ARMC12Q5T9G4 340 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 DENND2CQ68D51 928 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 KCTD16Q68DU8 428 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 DARS2Q6PI48 645 aaKnown RBP8.69□□□□□ -1.02
COPB1-210ENST00000533533 OGFOD3Q6PK18 319 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 ATG14Q6ZNE5 492 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 BBS12Q6ZW61 710 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 KDELC2Q7Z4H8 507 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 SPRED1Q7Z699 444 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 TAF8Q7Z7C8 310 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 VASH2Q86V25 355 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 ZSWIM9Q86XI8 627 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 TEX26Q8N6G2 289 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 FAM46DQ8NEK8 389 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 USP7Q93009 1102 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 PDXPQ96GD0 296 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 OLFM3Q96PB7 478 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 CMKLR1Q99788 373 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 FERMT1Q9BQL6 677 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 BRD8Q9H0E9 1235 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 C10orf88Q9H8K7 445 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 TRMT1Q9NXH9 659 aaKnown RBP8.69□□□□□ -1.02
COPB1-210ENST00000533533 KLHL8Q9P2G9 620 aaPredicted RBP8.69□□□□□ -1.02
COPB1-210ENST00000533533 ATP8A1Q9Y2Q0 1164 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 PCDHGA4Q9Y5G9 962 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 RNF215Q9Y6U7 377 aa8.69□□□□□ -1.02
COPB1-210ENST00000533533 CENPEQ02224 2701 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 A0A1W2PQ67 120 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 TMEM202A6NGA9 273 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 HACD1B0YJ81 288 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 APOC4-APOC2K7ER74 178 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 AGRPO00253 132 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 CACNB4O00305 520 aaPredicted RBP8.68□□□□□ -1.02
COPB1-210ENST00000533533 DDX3YO15523 660 aaKnown RBP8.68□□□□□ -1.02
COPB1-210ENST00000533533 ZSCAN12O43309 604 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 SUV39H1O43463 412 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 NUDT21O43809 227 aaKnown RBP8.68□□□□□ -1.02
COPB1-210ENST00000533533 SOCS5O75159 536 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 APOC2P02655 101 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 PCCBP05166 539 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 CR2P20023 1033 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 CES1P23141 567 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 NFKBIAP25963 317 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 RBL1P28749 1068 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 MMP12P39900 470 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 ETV5P41161 510 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 TNNT3P45378 269 aaPredicted RBP8.68□□□□□ -1.02
COPB1-210ENST00000533533 KIAA1024LP59773 190 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 IFI35P80217 286 aaPredicted RBP8.68□□□□□ -1.02
COPB1-210ENST00000533533 NIPAL4Q0D2K0 466 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 ARHGEF7Q14155 803 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 PRKD1Q15139 912 aaPredicted RBP8.68□□□□□ -1.02
COPB1-210ENST00000533533 PCSK7Q16549 785 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 TBR1Q16650 682 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 C14orf28Q4W4Y0 310 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 RALGPS1Q5JS13 557 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 PID1Q7Z2X4 250 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 TMPRSS9Q7Z410 1059 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 ZFAND4Q86XD8 727 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 DTX1Q86Y01 620 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 CDKL3Q8IVW4 592 aaPredicted RBP8.68□□□□□ -1.02
COPB1-210ENST00000533533 SLITRK4Q8IW52 837 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 SFTPA2Q8IWL1 248 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 NDUFAF2Q8N183 169 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 ZSCAN1Q8NBB4 408 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 PLA2G15Q8NCC3 412 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 LPCAT1Q8NF37 534 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 TRIM58Q8NG06 486 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 OR56A4Q8NGH8 313 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 ACTL9Q8TC94 416 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 HTR3CQ8WXA8 447 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 OR1E3Q8WZA6 343 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 FATE1Q969F0 183 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 HES6Q96HZ4 224 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 NSMCE3Q96MG7 304 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 HERPUD2Q9BSE4 406 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 KCNF1Q9H3M0 494 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 FGF22Q9HCT0 170 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 FOXJ2Q9P0K8 574 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 LRIT1Q9P2V4 623 aa8.68□□□□□ -1.02
COPB1-210ENST00000533533 AMACRQ9UHK6 382 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms