RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 STAMBPL1Q96FJ0 436 aa12.91□□□□□ -0.34
COPB1-209ENST00000533096 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.91□□□□□ -0.34
COPB1-209ENST00000533096 ZWILCHQ9H900 591 aa12.91□□□□□ -0.34
COPB1-209ENST00000533096 ARFGAP3Q9NP61 516 aa12.91□□□□□ -0.34
COPB1-209ENST00000533096 FANCLQ9NW38 375 aa12.91□□□□□ -0.34
COPB1-209ENST00000533096 MYO1AQ9UBC5 1043 aa12.91□□□□□ -0.34
COPB1-209ENST00000533096 CPNE7Q9UBL6 633 aa12.91□□□□□ -0.34
COPB1-209ENST00000533096 LNPEPQ9UIQ6 1025 aa12.91□□□□□ -0.34
COPB1-209ENST00000533096 CHKBQ9Y259 395 aa12.91□□□□□ -0.34
COPB1-209ENST00000533096 SIK3Q9Y2K2 1263 aa12.91□□□□□ -0.34
COPB1-209ENST00000533096 OAS3Q9Y6K5 1087 aaKnown RBP12.91□□□□□ -0.34
COPB1-209ENST00000533096 TMEM191CA6NGB0 347 aa12.9□□□□□ -0.34
COPB1-209ENST00000533096 EIF3CLB5ME19 914 aaKnown RBP12.9□□□□□ -0.34
COPB1-209ENST00000533096 H3BRJ5 948 aa12.9□□□□□ -0.34
COPB1-209ENST00000533096 MAFKO60675 156 aa12.9□□□□□ -0.34
COPB1-209ENST00000533096 RASSF9O75901 435 aa12.9□□□□□ -0.34
COPB1-209ENST00000533096 DNAJB5O75953 348 aa12.9□□□□□ -0.34
COPB1-209ENST00000533096 KIAA0754O94854 1291 aa12.9□□□□□ -0.34
COPB1-209ENST00000533096 DLGAP3O95886 979 aa12.9□□□□□ -0.34
COPB1-209ENST00000533096 PEX11BO96011 259 aa12.9□□□□□ -0.34
COPB1-209ENST00000533096 PDGFAP04085 211 aa12.9□□□□□ -0.34
COPB1-209ENST00000533096 ARL4AP40617 200 aa12.9□□□□□ -0.34
COPB1-209ENST00000533096 CD97P48960 835 aa12.9□□□□□ -0.34
COPB1-209ENST00000533096 HCAR3P49019 387 aa12.9□□□□□ -0.34
COPB1-209ENST00000533096 GFERP55789 205 aa12.9□□□□□ -0.34
COPB1-209ENST00000533096 SMTNL2Q2TAL5 461 aa12.9□□□□□ -0.34
COPB1-209ENST00000533096 ZNF648Q5T619 568 aaPredicted RBP12.9□□□□□ -0.34
COPB1-209ENST00000533096 TMCO3Q6UWJ1 677 aa12.9□□□□□ -0.34
COPB1-209ENST00000533096 EIF3CQ99613 913 aaKnown RBP12.9□□□□□ -0.34
COPB1-209ENST00000533096 OSGEPL1Q9H4B0 414 aa12.9□□□□□ -0.34
COPB1-209ENST00000533096 MAP10Q9P2G4 905 aa12.9□□□□□ -0.34
COPB1-209ENST00000533096 POLHQ9Y253 713 aa12.9□□□□□ -0.34
COPB1-209ENST00000533096 TTLL3Q9Y4R7 772 aa12.9□□□□□ -0.34
COPB1-209ENST00000533096 DOCK4Q8N1I0 1966 aa12.89□□□□□ -0.35
COPB1-209ENST00000533096 KIF1CO43896 1103 aaKnown RBP12.89□□□□□ -0.35
COPB1-209ENST00000533096 DNAJC6O75061 913 aa12.89□□□□□ -0.35
COPB1-209ENST00000533096 SEMA7AO75326 666 aa12.89□□□□□ -0.35
COPB1-209ENST00000533096 CREG1O75629 220 aa12.89□□□□□ -0.35
COPB1-209ENST00000533096 RFPL1O75677 317 aa12.89□□□□□ -0.35
COPB1-209ENST00000533096 NDUFA10O95299 355 aa12.89□□□□□ -0.35
COPB1-209ENST00000533096 CDK11BP21127 795 aaKnown RBP12.89□□□□□ -0.35
COPB1-209ENST00000533096 CASP14P31944 242 aa12.89□□□□□ -0.35
COPB1-209ENST00000533096 CCL11P51671 97 aa12.89□□□□□ -0.35
COPB1-209ENST00000533096 DPYSQ14117 519 aa12.89□□□□□ -0.35
COPB1-209ENST00000533096 LYSMD3Q7Z3D4 306 aa12.89□□□□□ -0.35
COPB1-209ENST00000533096 ATPAF2Q8N5M1 289 aa12.89□□□□□ -0.35
COPB1-209ENST00000533096 ENOX1Q8TC92 643 aaKnown RBP12.89□□□□□ -0.35
COPB1-209ENST00000533096 CPT1CQ8TCG5 803 aa12.89□□□□□ -0.35
COPB1-209ENST00000533096 ZNF653Q96CK0 615 aa12.89□□□□□ -0.35
COPB1-209ENST00000533096 COX14Q96I36 57 aa12.89□□□□□ -0.35
COPB1-209ENST00000533096 C9orf72Q96LT7 481 aa12.89□□□□□ -0.35
COPB1-209ENST00000533096 PLEKHG4BQ96PX9 1271 aa12.89□□□□□ -0.35
COPB1-209ENST00000533096 MCCC1Q96RQ3 725 aaPredicted RBP12.89□□□□□ -0.35
COPB1-209ENST00000533096 MGME1Q9BQP7 344 aa12.89□□□□□ -0.35
COPB1-209ENST00000533096 CASS4Q9NQ75 786 aa12.89□□□□□ -0.35
COPB1-209ENST00000533096 KLC4Q9NSK0 619 aa12.89□□□□□ -0.35
COPB1-209ENST00000533096 TRIM10Q9UDY6 481 aa12.89□□□□□ -0.35
COPB1-209ENST00000533096 PADI1Q9ULC6 663 aa12.89□□□□□ -0.35
COPB1-209ENST00000533096 CNOT6Q9ULM6 557 aaKnown RBP12.89□□□□□ -0.35
COPB1-209ENST00000533096 SLC30A1Q9Y6M5 507 aa12.89□□□□□ -0.35
COPB1-209ENST00000533096 CHD5Q8TDI0 1954 aa12.89□□□□□ -0.35
COPB1-209ENST00000533096 GRID2O43424 1007 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 SPAG6O75602 509 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 UBXN7O94888 489 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 VIPP01282 170 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 FTLP02792 175 aaPredicted RBP12.88□□□□□ -0.35
COPB1-209ENST00000533096 PYGLP06737 847 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 CCDC172P0C7W6 258 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 F3P13726 295 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 FERP16591 822 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 COL8A1P27658 744 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 LEPRP48357 1165 aaKnown RBP12.88□□□□□ -0.35
COPB1-209ENST00000533096 DSC2Q02487 901 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 SEPT7Q16181 437 aaKnown RBP12.88□□□□□ -0.35
COPB1-209ENST00000533096 EIF2S3LQ2VIR3 472 aaKnown RBP12.88□□□□□ -0.35
COPB1-209ENST00000533096 NADK2Q4G0N4 442 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 CAPRIN2Q6IMN6 1127 aaKnown RBP12.88□□□□□ -0.35
COPB1-209ENST00000533096 PLEKHA7Q6IQ23 1121 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 FAM199XQ6PEV8 388 aaPredicted RBP12.88□□□□□ -0.35
COPB1-209ENST00000533096 FAM92BQ6ZTR7 304 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 NLRP8Q86W28 1048 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 TRIM48Q8IWZ4 208 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 SSC4DQ8WTU2 575 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 LRRN4Q8WUT4 740 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 SPOCK2Q92563 424 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 HERPUD2Q9BSE4 406 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 TRIM55Q9BYV6 548 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 NUP62CLQ9H1M0 184 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 FAM83DQ9H4H8 585 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 SCHIP1Q9P0W5 487 aaPredicted RBP12.88□□□□□ -0.35
COPB1-209ENST00000533096 KCND3Q9UK17 655 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 DNAJC16Q9Y2G8 782 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 PPIL1Q9Y3C6 166 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 DOPEY2Q9Y3R5 2298 aa12.88□□□□□ -0.35
COPB1-209ENST00000533096 SDK2Q58EX2 2172 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 KIR2DS5A0A0G2JLQ3 304 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 A0A0G2JNG1 304 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 A0A0J9YYE9 177 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 OR5K4A6NMS3 321 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 KIR2DS3K7RE56 304 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms