RNA–Protein interactions for RNA: ENST00000532475.1

NUP98-219, Transcript of nucleoporin 98, humanhuman

TSL 4

Gene NUP98, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-219ENST00000532475 NRROSQ86YC3 692 aa8.25□□□□□ -1.09
NUP98-219ENST00000532475 SRRM1Q8IYB3 904 aaKnown RBP8.25□□□□□ -1.09
NUP98-219ENST00000532475 NRSN1Q8IZ57 195 aa8.25□□□□□ -1.09
NUP98-219ENST00000532475 C1orf131Q8NDD1 294 aaKnown RBP8.25□□□□□ -1.09
NUP98-219ENST00000532475 AGBL5Q8NDL9 886 aa8.25□□□□□ -1.09
NUP98-219ENST00000532475 OR56A4Q8NGH8 313 aa8.25□□□□□ -1.09
NUP98-219ENST00000532475 ARHGEF2Q92974 986 aaKnown RBP8.25□□□□□ -1.09
NUP98-219ENST00000532475 RTP4Q96DX8 246 aa8.25□□□□□ -1.09
NUP98-219ENST00000532475 DHRS1Q96LJ7 313 aa8.25□□□□□ -1.09
NUP98-219ENST00000532475 DDA1Q9BW61 102 aa8.25□□□□□ -1.09
NUP98-219ENST00000532475 C1QTNF7Q9BXJ2 289 aa8.25□□□□□ -1.09
NUP98-219ENST00000532475 ZYG11BQ9C0D3 744 aa8.25□□□□□ -1.09
NUP98-219ENST00000532475 SCAND2PQ9GZW5 306 aaPredicted RBP8.25□□□□□ -1.09
NUP98-219ENST00000532475 RASSF4Q9H2L5 321 aa8.25□□□□□ -1.09
NUP98-219ENST00000532475 GOLPH3LQ9H4A5 285 aa8.25□□□□□ -1.09
NUP98-219ENST00000532475 RUBCNLQ9H714 662 aa8.25□□□□□ -1.09
NUP98-219ENST00000532475 CYP4F12Q9HCS2 524 aa8.25□□□□□ -1.09
NUP98-219ENST00000532475 DNAI1Q9UI46 699 aa8.25□□□□□ -1.09
NUP98-219ENST00000532475 ADGRG4Q8IZF6 3080 aa8.25□□□□□ -1.09
NUP98-219ENST00000532475 FAM237AA0A1B0GTK4 181 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 TTLL8A6PVC2 850 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 RHPN2P1A8MT19 583 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 A8MU76 341 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 FAM72CH0Y354 149 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 CAPN5O15484 640 aaPredicted RBP8.24□□□□□ -1.09
NUP98-219ENST00000532475 DAB1O75553 588 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 SMNDC1O75940 238 aaKnown RBP eCLIP8.24□□□□□ -1.09
NUP98-219ENST00000532475 MAP3K6O95382 1288 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 PIGNO95427 931 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 CLDN1O95832 211 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 GSRP00390 522 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 AK4P27144 223 aaPredicted RBP8.24□□□□□ -1.09
NUP98-219ENST00000532475 CSF2RBP32927 897 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 CSTF2P33240 577 aaKnown RBP eCLIP8.24□□□□□ -1.09
NUP98-219ENST00000532475 USP8P40818 1118 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 SNRPD1P62314 119 aaKnown RBP8.24□□□□□ -1.09
NUP98-219ENST00000532475 DEUP1Q05D60 604 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 FAPQ12884 760 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 MTA1Q13330 715 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 POLD3Q15054 466 aaPredicted RBP8.24□□□□□ -1.09
NUP98-219ENST00000532475 MEA1Q16626 185 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 UGP2Q16851 508 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 PTPN20Q4JDL3 420 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 C2CD6Q53TS8 623 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 DCAF12Q5T6F0 453 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 FAM72AQ5TYM5 149 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 ATL3Q6DD88 541 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 FAM72DQ6L9T8 149 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 TRNP1Q6NT89 227 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 TCTN3Q6NUS6 607 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 ASB18Q6ZVZ8 466 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 SLC26A9Q7LBE3 791 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 PHLDB2Q86SQ0 1253 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 TMEM135Q86UB9 458 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 HEATR4Q86WZ0 1026 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 FAM72BQ86X60 149 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 ZSWIM9Q86XI8 627 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 NLGN4XQ8N0W4 816 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 BMPERQ8N8U9 685 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 GALNT11Q8NCW6 608 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 NLGN4YQ8NFZ3 816 aaPredicted RBP8.24□□□□□ -1.09
NUP98-219ENST00000532475 STARD8Q92502 1023 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 HMCESQ96FZ2 354 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 TSG101Q99816 390 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 OSBPL1AQ9BXW6 950 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 TTYH3Q9C0H2 523 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 KLC2Q9H0B6 622 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 INTS2Q9H0H0 1204 aaKnown RBP8.24□□□□□ -1.09
NUP98-219ENST00000532475 SUDS3Q9H7L9 328 aaPredicted RBP8.24□□□□□ -1.09
NUP98-219ENST00000532475 APMAPQ9HDC9 416 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 PRDM8Q9NQV8 689 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.24□□□□□ -1.09
NUP98-219ENST00000532475 MOSPD1Q9UJG1 213 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 TLK1Q9UKI8 766 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 CSMD2Q7Z408 3487 aa8.24□□□□□ -1.09
NUP98-219ENST00000532475 MTORP42345 2549 aa8.23□□□□□ -1.09
NUP98-219ENST00000532475 TRBV23OR9-2A0A075B6M9 112 aa8.23□□□□□ -1.09
NUP98-219ENST00000532475 B4E171 279 aa8.23□□□□□ -1.09
NUP98-219ENST00000532475 BUB1O43683 1085 aa8.23□□□□□ -1.09
NUP98-219ENST00000532475 BUB1BO60566 1050 aaPredicted RBP8.23□□□□□ -1.09
NUP98-219ENST00000532475 RECQL5O94762 991 aaPredicted RBP8.23□□□□□ -1.09
NUP98-219ENST00000532475 TMCC1O94876 653 aa8.23□□□□□ -1.09
NUP98-219ENST00000532475 F9P00740 461 aa8.23□□□□□ -1.09
NUP98-219ENST00000532475 GHRHP01286 108 aa8.23□□□□□ -1.09
NUP98-219ENST00000532475 GSTP1P09211 210 aaKnown RBP8.23□□□□□ -1.09
NUP98-219ENST00000532475 THRAP10827 490 aa8.23□□□□□ -1.09
NUP98-219ENST00000532475 TCN2P20062 427 aa8.23□□□□□ -1.09
NUP98-219ENST00000532475 MAP4P27816 1152 aaKnown RBP8.23□□□□□ -1.09
NUP98-219ENST00000532475 TSPAN7P41732 249 aa8.23□□□□□ -1.09
NUP98-219ENST00000532475 ATP11AP98196 1134 aa8.23□□□□□ -1.09
NUP98-219ENST00000532475 SLC9A5Q14940 896 aa8.23□□□□□ -1.09
NUP98-219ENST00000532475 NR1D2Q14995 579 aa8.23□□□□□ -1.09
NUP98-219ENST00000532475 KRT72Q14CN4 511 aa8.23□□□□□ -1.09
NUP98-219ENST00000532475 SLC25A52Q3SY17 297 aa8.23□□□□□ -1.09
NUP98-219ENST00000532475 ZNF658Q5TYW1 1059 aaPredicted RBP8.23□□□□□ -1.09
NUP98-219ENST00000532475 ISM2Q6H9L7 571 aa8.23□□□□□ -1.09
NUP98-219ENST00000532475 HDXQ7Z353 690 aa8.23□□□□□ -1.09
NUP98-219ENST00000532475 KDELC2Q7Z4H8 507 aa8.23□□□□□ -1.09
NUP98-219ENST00000532475 NLRP14Q86W24 1093 aa8.23□□□□□ -1.09
NUP98-219ENST00000532475 FAM131BQ86XD5 332 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms