RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 HDAC8Q9BY41 377 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 PDFQ9HBH1 243 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 ATP13A2Q9NQ11 1180 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 ETNK2Q9NVF9 386 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 DNAJC28Q9NX36 388 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 NKIRAS2Q9NYR9 191 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 PRR13Q9NZ81 148 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 CDC23Q9UJX2 597 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 SLC13A4Q9UKG4 626 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 MFHAS1Q9Y4C4 1052 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 HYOU1Q9Y4L1 999 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 ALG6Q9Y672 507 aa5.83□□□□□ -1.48
HMGB1P42-201ENST00000532126 GPR179Q6PRD1 2367 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 FANCMQ8IYD8 2048 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 USP34Q70CQ2 3546 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 A0A1W2PPC4 97 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 C16orf96A6NNT2 1141 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 RNF103O00237 685 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 AREL1O15033 823 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 PLOD3O60568 738 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 RNGTTO60942 597 aaKnown RBP5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 UGT2B4P06133 528 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 IGHV4-34P06331 123 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 SYPP08247 313 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 BMP4P12644 408 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 ADRB3P13945 408 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 ENGP17813 658 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 MX2P20592 715 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 MAT2AP31153 395 aaKnown RBP5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 CCR5P51681 352 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 AFF3P51826 1226 aaKnown RBP5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 VAV2P52735 878 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 MAPK10P53779 464 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 ATXN3P54252 364 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 PCBP4P57723 403 aaKnown RBP5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 TAS2R38P59533 333 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 PPP2CBP62714 309 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 PPP2CAP67775 309 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 SLC10A7Q0GE19 358 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 GALNT2Q10471 571 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 KIF5AQ12840 1032 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 ZNF235Q14590 738 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 PAFAH1B3Q15102 231 aaKnown RBP5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 PRSS53Q2L4Q9 553 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 PGS1Q32NB8 556 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 CFAP58Q5T655 872 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 PIP5KL1Q5T9C9 394 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 STPG1Q5TH74 334 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 MARC1Q5VT66 337 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 NCBP2-AS2Q69YL0 99 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 C11orf63Q6NUN7 778 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 NEK5Q6P3R8 708 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 GDPD4Q6W3E5 623 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 FRMD7Q6ZUT3 714 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 PARS2Q7L3T8 475 aaKnown RBP5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 OVCH1Q7RTY7 1134 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 DAAM2Q86T65 1068 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 PRPF39Q86UA1 669 aaKnown RBP5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 LRRC49Q8IUZ0 686 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 TMEM139Q8IV31 216 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 PPIL6Q8IXY8 311 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 BBS5Q8N3I7 341 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 PQLC3Q8N755 202 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 ZNF527Q8NB42 609 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 PPP1R35Q8TAP8 253 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 BAHD1Q8TBE0 780 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 FAM131CQ96AQ9 280 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 FAF2Q96CS3 445 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 RMDN1Q96DB5 314 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 KLHL32Q96NJ5 620 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 ZNF599Q96NL3 588 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 EDEM2Q9BV94 578 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 GTPBP2Q9BX10 602 aaKnown RBP5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 MAK16Q9BXY0 300 aaKnown RBP5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 CPEB1Q9BZB8 566 aaKnown RBP5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 ZDHHC5Q9C0B5 715 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 TRIT1Q9H3H1 467 aaKnown RBP5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 PREBQ9HCU5 417 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 FSCN3Q9NQT6 498 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 SMYD2Q9NRG4 433 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 RXFP3Q9NSD7 469 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 LHX3Q9UBR4 397 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 HIF3AQ9Y2N7 669 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 REXO2Q9Y3B8 237 aaKnown RBP5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 SPO11Q9Y5K1 396 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 GPR45Q9Y5Y3 372 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 DUSP10Q9Y6W6 482 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 PIEZO1Q92508 2521 aa5.82□□□□□ -1.48
HMGB1P42-201ENST00000532126 CKAP5Q14008 2032 aa5.81□□□□□ -1.48
HMGB1P42-201ENST00000532126 A0A1B0GVT2 93 aa5.81□□□□□ -1.48
HMGB1P42-201ENST00000532126 CCDC66A2RUB6 948 aa5.81□□□□□ -1.48
HMGB1P42-201ENST00000532126 GOLGA6L3A6NEY3 463 aa5.81□□□□□ -1.48
HMGB1P42-201ENST00000532126 C3orf70A6NLC5 250 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P42-201ENST00000532126 C4orf47A7E2U8 309 aa5.81□□□□□ -1.48
HMGB1P42-201ENST00000532126 BTNL10A8MVZ5 291 aa5.81□□□□□ -1.48
HMGB1P42-201ENST00000532126 ZNF487B1APH4 448 aa5.81□□□□□ -1.48
HMGB1P42-201ENST00000532126 APOL1O14791 398 aa5.81□□□□□ -1.48
HMGB1P42-201ENST00000532126 SLC30A4O14863 429 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms