RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 SSX5O60225 188 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 B4GALT4O60513 344 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 LPXNO60711 386 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 MED24O75448 989 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 PRDM1O75626 825 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 GH1P01241 217 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 ERBB2P04626 1255 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 OR52Z1P0C646 297 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 GPR89BP0CG08 455 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 C8orf89P0DMQ9 161 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 GHRP10912 638 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 EPORP19235 508 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 AHCYP23526 432 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 HOXC9P31274 260 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 RABIFP47224 123 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 CAMLGP49069 296 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 NME5P56597 212 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 CLDN2P57739 230 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 CYP4F2P78329 520 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 PRKCEQ02156 737 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 HHEXQ03014 270 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 SLC18A2Q05940 514 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 MRPL28Q13084 256 aaKnown RBP4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 TMED1Q13445 227 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 LPIN1Q14693 890 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 PTPRRQ15256 657 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 SMN1Q16637 294 aaKnown RBP4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 FAM174BQ3ZCQ3 159 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 PLAC9Q5JTB6 97 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 RIPPLY2Q5TAB7 128 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 CASC4Q6P4E1 433 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 MPZL3Q6UWV2 235 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 ATG14Q6ZNE5 492 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 RGS9BPQ6ZS82 235 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 INTS8Q75QN2 995 aaKnown RBP4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 WDR5BQ86VZ2 330 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 CIR1Q86X95 450 aaPredicted RBP4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 TDRPQ86YL5 185 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 PM20D2Q8IYS1 436 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 ELMOD2Q8IZ81 293 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 FBXW8Q8N3Y1 598 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 SFRP1Q8N474 314 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 FAM47BQ8NA70 645 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 AGBL3Q8NEM8 1001 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 OR52K2Q8NGK3 314 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 EXD1Q8NHP7 514 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 BBS10Q8TAM1 723 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 URGCPQ8TCY9 931 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 SNAPC3Q92966 411 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 NACC2Q96BF6 587 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 OTULINQ96BN8 352 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 FBXL8Q96CD0 374 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 MS4A10Q96PG2 267 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 MMRN2Q9H8L6 949 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 SYTL2Q9HCH5 934 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 PNPLA3Q9NST1 481 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 TMEM161AQ9NX61 479 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 RABL2AQ9UBK7 228 aaPredicted RBP4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 MAD2L2Q9UI95 211 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 R3HDM2Q9Y2K5 976 aaKnown RBP4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 TEX264Q9Y6I9 313 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 CEPT1Q9Y6K0 416 aa4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 DDX49Q9Y6V7 483 aaKnown RBP4.33□□□□□ -1.72
AC055878.1-201ENST00000531858 ARHGEF40Q8TER5 1519 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 ACEP12821 1306 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 KANSL1LA0AUZ9 987 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 AP3B1O00203 1094 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 CACNB4O00305 520 aaPredicted RBP4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 RNASET2O00584 256 aaKnown RBP4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 MAP2K7O14733 419 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 IKBKBO14920 756 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 RNMTO43148 476 aaKnown RBP4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 RSL1D1O76021 490 aaKnown RBP4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 IFNB1P01574 187 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 FGBP02675 491 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 KRT8P05787 483 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 LCKP06239 509 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 ABHD2P08910 425 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 KRT5P13647 590 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 ETS1P14921 441 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 GNAZP19086 355 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 CD27P26842 260 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 HOXD9P28356 352 aaPredicted RBP4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 SHMT1P34896 483 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 SLC16A2P36021 539 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 MDH1P40925 334 aaKnown RBP4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 MAGEA4P43358 317 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 GPR12P47775 334 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 CYP2J2P51589 502 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 HNRNPMP52272 730 aaKnown RBP eCLIP4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 PDE1AP54750 535 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 EPHB4P54760 987 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 ADARP55265 1226 aaKnown RBP4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 MZT1Q08AG7 82 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 SREBF2Q12772 1141 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 TSTA3Q13630 321 aaPredicted RBP4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 KRT33BQ14525 404 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 NR1D2Q14995 579 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 DLG2Q15700 870 aa4.32□□□□□ -1.72
AC055878.1-201ENST00000531858 HS1BP3Q53T59 392 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms