RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 RNASEH2BQ5TBB1 312 aaKnown RBP8.45□□□□□ -1.06
CTNND1-227ENST00000530748 TAPT1Q6NXT6 567 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 PSRC1Q6PGN9 363 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-227ENST00000530748 NPAS4Q8IUM7 802 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 NETO2Q8NC67 525 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 TWIST2Q8WVJ9 160 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 AP2M1Q96CW1 435 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 DEFB118Q96PH6 123 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 DPEP3Q9H4B8 488 aa8.45□□□□□ -1.06
CTNND1-227ENST00000530748 IMP3Q9NV31 184 aaKnown RBP8.45□□□□□ -1.06
CTNND1-227ENST00000530748 CORO1CQ9ULV4 474 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-227ENST00000530748 PTPRJQ12913 1337 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 PRNPP04156 253 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 FABP3P05413 133 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 OR4Q2P0C623 313 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 ASMTP46597 345 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 OMPP47874 163 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 FLT3LGP49771 235 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 ZNF132P52740 706 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 ITGADQ13349 1161 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 GTF2H2Q13888 395 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 GTF2H2CQ6P1K8 395 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 TMPRSS11BQ86T26 416 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 C12orf50Q8NA57 414 aaPredicted RBP8.44□□□□□ -1.06
CTNND1-227ENST00000530748 FLCNQ8NFG4 579 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 HMCESQ96FZ2 354 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 CLK4Q9HAZ1 481 aaKnown RBP8.44□□□□□ -1.06
CTNND1-227ENST00000530748 CLIC5Q9NZA1 410 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 RSL24D1Q9UHA3 163 aaKnown RBP8.44□□□□□ -1.06
CTNND1-227ENST00000530748 TRPS1Q9UHF7 1281 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 ZNF180Q9UJW8 692 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 PLIN4Q96Q06 1357 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 UBE2QL1A1L167 161 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 LRIG2O94898 1065 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 CLDN9O95484 217 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 MMP8P22894 467 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 CMPK1P30085 196 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 ADRA1BP35368 520 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 FUT2Q10981 343 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 DDI2Q5TDH0 399 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 ARHGAP22Q7Z5H3 698 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 PIH1D2Q8WWB5 315 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 COQ7Q99807 217 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 SDCBP2Q9H190 292 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 DUS2Q9NX74 493 aaKnown RBP8.44□□□□□ -1.06
CTNND1-227ENST00000530748 MATN3O15232 486 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 TREHO43280 583 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 PKMP14618 531 aaKnown RBP8.44□□□□□ -1.06
CTNND1-227ENST00000530748 RCVRNP35243 200 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 CYP4F2P78329 520 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 CYP4F3Q08477 520 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 PPIGQ13427 754 aaKnown RBP eCLIP8.44□□□□□ -1.061e-7■□□□□ 10.9
CTNND1-227ENST00000530748 QPRTQ15274 297 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 RGS21Q2M5E4 152 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 BEND5Q7L4P6 421 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 CMC1Q7Z7K0 106 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 SIX5Q8N196 739 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 TTC29Q8NA56 475 aaPredicted RBP8.44□□□□□ -1.06
CTNND1-227ENST00000530748 OR4K2Q8NGD2 314 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 ZNF354BQ96LW1 612 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 ST6GALNAC4Q9H4F1 302 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 C5orf60A6NFR6 353 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 SLC38A8A6NNN8 435 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 AGRPO00253 132 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 NDST3O95803 873 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 C1RP00736 705 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 CDKN2BP42772 138 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 ACTR3P61158 418 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 KCNJ2P63252 427 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 SLC20A2Q08357 652 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 ZNF155Q12901 538 aaPredicted RBP8.44□□□□□ -1.06
CTNND1-227ENST00000530748 ZNF846Q147U1 533 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 KLHL12Q53G59 568 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 TBC1D21Q8IYX1 336 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 MTMR14Q8NCE2 650 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 ADCY4Q8NFM4 1077 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 NDRG1Q92597 394 aaKnown RBP8.44□□□□□ -1.06
CTNND1-227ENST00000530748 HNRNPABQ99729 332 aaKnown RBP8.44□□□□□ -1.06
CTNND1-227ENST00000530748 MCMBPQ9BTE3 642 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 FGFBP2Q9BYJ0 223 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 EVLQ9UI08 416 aaPredicted RBP8.44□□□□□ -1.06
CTNND1-227ENST00000530748 PADI3Q9ULW8 664 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 REXO2Q9Y3B8 237 aaKnown RBP8.44□□□□□ -1.06
CTNND1-227ENST00000530748 RBM47A0AV96 593 aaKnown RBP8.44□□□□□ -1.06
CTNND1-227ENST00000530748 FAM155BO75949 473 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 SMPD1P17405 629 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 TGFBR2P37173 567 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 MTHFRP42898 656 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 SSR2P43308 183 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 PNLIPRP1P54315 467 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 PTGES3Q15185 160 aaKnown RBP8.44□□□□□ -1.06
CTNND1-227ENST00000530748 PRR23CQ6ZRP0 262 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 CPSF7Q8N684 471 aaKnown RBP8.44□□□□□ -1.06
CTNND1-227ENST00000530748 AMER2Q8N7J2 671 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 DHX33Q9H6R0 707 aaKnown RBP8.44□□□□□ -1.06
CTNND1-227ENST00000530748 TLE6Q9H808 572 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 NECTIN3Q9NQS3 549 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 LTN1O94822 1766 aa8.44□□□□□ -1.06
CTNND1-227ENST00000530748 CAMTA1Q9Y6Y1 1673 aa8.43□□□□□ -1.06
CTNND1-227ENST00000530748 A0A0G2JLL6 359 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms