RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 STAMQ92783 540 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 ZBTB10Q96DT7 871 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 CD180Q99467 661 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 TMEM47Q9BQJ4 181 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 RNF41Q9H4P4 317 aaPredicted RBP4.97□□□□□ -1.61
CSDE1-212ENST00000529046 EBF3Q9H4W6 596 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 MAP3K20Q9NYL2 800 aaKnown RBP4.97□□□□□ -1.61
CSDE1-212ENST00000529046 IFT80Q9P2H3 777 aaPredicted RBP4.97□□□□□ -1.61
CSDE1-212ENST00000529046 NLKQ9UBE8 527 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 RAI2Q9Y5P3 530 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 RAD50Q92878 1312 aa4.97□□□□□ -1.61
CSDE1-212ENST00000529046 C17orf113A0A1B0GUU1 675 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 FAM90A10PA6NDY2 464 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 TEX22C9J3V5 150 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 TAF4O00268 1085 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 HIP1O00291 1037 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 RANBP6O60518 1105 aaKnown RBP4.96□□□□□ -1.62
CSDE1-212ENST00000529046 NMT2O60551 498 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 ADAP00813 363 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 KLKB1P03952 638 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 HNRNPA1P09651 372 aaKnown RBP eCLIP4.96□□□□□ -1.62
CSDE1-212ENST00000529046 MYZAPP0CAP1 466 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 PDHBP11177 359 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 PAX3P23760 479 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 BLKP51451 505 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 RRP1P56182 461 aaKnown RBP4.96□□□□□ -1.62
CSDE1-212ENST00000529046 IKQ13123 557 aaPredicted RBP4.96□□□□□ -1.62
CSDE1-212ENST00000529046 TBX2Q13207 712 aaPredicted RBP4.96□□□□□ -1.62
CSDE1-212ENST00000529046 ALG10Q5BKT4 473 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 ZNF766Q5HY98 468 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 ALG10BQ5I7T1 473 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 CXCL17Q6UXB2 119 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 ZNF517Q6ZMY9 492 aaPredicted RBP4.96□□□□□ -1.62
CSDE1-212ENST00000529046 MFSD6Q6ZSS7 791 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 PIM3Q86V86 326 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 FAM185AQ8N0U4 392 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 ZNF548Q8NEK5 533 aaPredicted RBP4.96□□□□□ -1.62
CSDE1-212ENST00000529046 BICD2Q8TD16 824 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 SCFD2Q8WU76 684 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 ESR2Q92731 530 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 HVCN1Q96D96 273 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 IWS1Q96ST2 819 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 ALDH8A1Q9H2A2 487 aaPredicted RBP4.96□□□□□ -1.62
CSDE1-212ENST00000529046 KLHL31Q9H511 634 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 TASP1Q9H6P5 420 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 PPP1R14DQ9NXH3 145 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 CCPG1Q9ULG6 757 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 PRUNE2Q8WUY3 3088 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 CHD9Q3L8U1 2897 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 EYSQ5T1H1 3165 aa4.96□□□□□ -1.62
CSDE1-212ENST00000529046 MYH4Q9Y623 1939 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 A0A1W2PQM1 296 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 TARSL2A2RTX5 802 aaKnown RBP4.95□□□□□ -1.62
CSDE1-212ENST00000529046 CBY3A6NI87 242 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 H3BNX3 289 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 PER2O15055 1255 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 TMCC1O94876 653 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 OAZ2O95190 189 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 PSG1P11464 419 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 KLRC2P26717 231 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 TNFSF8P32971 234 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 CIITAP33076 1130 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 PGM1P36871 562 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 SKIV2L2P42285 1042 aaKnown RBP4.95□□□□□ -1.62
CSDE1-212ENST00000529046 PTPN9P43378 593 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 CENPAP49450 140 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 CLCNKBP51801 687 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 LINC00205P59089 165 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 RPS6P62753 249 aaKnown RBP4.95□□□□□ -1.62
CSDE1-212ENST00000529046 BEX3Q00994 111 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 TRAF1Q13077 416 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 CAMK1Q14012 370 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 BAATQ14032 418 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-212ENST00000529046 FBXO43Q4G163 708 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 JAKMIP3Q5VZ66 844 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 TMEM268Q5VZI3 342 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 CCDC70Q6NSX1 233 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 INO80CQ6PI98 192 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-212ENST00000529046 CCDC25Q86WR0 208 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 IQCA1Q86XH1 822 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 ZMIZ2Q8NF64 920 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 ST8SIA4Q92187 359 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 CNOT9Q92600 299 aaKnown RBP4.95□□□□□ -1.62
CSDE1-212ENST00000529046 CENPIQ92674 756 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-212ENST00000529046 EIF2AK1Q9BQI3 630 aaKnown RBP4.95□□□□□ -1.62
CSDE1-212ENST00000529046 MTG1Q9BT17 334 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-212ENST00000529046 IFT27Q9BW83 186 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 RWDD1Q9H446 243 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-212ENST00000529046 CXorf56Q9H5V9 222 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 SLC28A3Q9HAS3 691 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 SEL1LQ9UBV2 794 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 CTNNA3Q9UI47 895 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 CYP46A1Q9Y6A2 500 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 SQORQ9Y6N5 450 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 ABCB11O95342 1321 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 CCDC171Q6TFL3 1326 aa4.95□□□□□ -1.62
CSDE1-212ENST00000529046 A0A0D9SFI3 127 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 C17orf102A2RUQ5 167 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 CD8B2A6NJW9 211 aa4.94□□□□□ -1.62
CSDE1-212ENST00000529046 A6NLC8 198 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms