RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 PGDP52209 483 aa18.78■□□□□ 0.6
SSRP1-204ENST00000529002 MAXP61244 160 aa18.78■□□□□ 0.6
SSRP1-204ENST00000529002 DPTQ07507 201 aa18.78■□□□□ 0.6
SSRP1-204ENST00000529002 IL10RBQ08334 325 aa18.78■□□□□ 0.6
SSRP1-204ENST00000529002 TPD52L1Q16890 204 aaPredicted RBP18.78■□□□□ 0.6
SSRP1-204ENST00000529002 ZNF677Q86XU0 584 aa18.78■□□□□ 0.6
SSRP1-204ENST00000529002 C3orf20Q8ND61 904 aa18.78■□□□□ 0.6
SSRP1-204ENST00000529002 C9orf72Q96LT7 481 aa18.78■□□□□ 0.6
SSRP1-204ENST00000529002 TGM7Q96PF1 710 aa18.78■□□□□ 0.6
SSRP1-204ENST00000529002 KCTD15Q96SI1 283 aaPredicted RBP18.78■□□□□ 0.6
SSRP1-204ENST00000529002 SLC25A23Q9BV35 468 aa18.78■□□□□ 0.6
SSRP1-204ENST00000529002 GANQ9H2C0 597 aa18.78■□□□□ 0.6
SSRP1-204ENST00000529002 DHX35Q9H5Z1 703 aaKnown RBP18.78■□□□□ 0.6
SSRP1-204ENST00000529002 KCTD5Q9NXV2 234 aa18.78■□□□□ 0.6
SSRP1-204ENST00000529002 MAP10Q9P2G4 905 aa18.78■□□□□ 0.6
SSRP1-204ENST00000529002 CNOT8Q9UFF9 292 aaKnown RBP18.78■□□□□ 0.6
SSRP1-204ENST00000529002 PHTF1Q9UMS5 762 aa18.78■□□□□ 0.6
SSRP1-204ENST00000529002 AP4E1Q9UPM8 1137 aa18.78■□□□□ 0.6
SSRP1-204ENST00000529002 SLC30A1Q9Y6M5 507 aa18.78■□□□□ 0.6
SSRP1-204ENST00000529002 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.77■□□□□ 0.6
SSRP1-204ENST00000529002 KIF1CO43896 1103 aaKnown RBP18.77■□□□□ 0.6
SSRP1-204ENST00000529002 ANKRD34CP0C6C1 535 aa18.77■□□□□ 0.6
SSRP1-204ENST00000529002 ACP5P13686 325 aa18.77■□□□□ 0.6
SSRP1-204ENST00000529002 NSFP46459 744 aaKnown RBP18.77■□□□□ 0.6
SSRP1-204ENST00000529002 EPHA4P54764 986 aa18.77■□□□□ 0.6
SSRP1-204ENST00000529002 GSCP56915 257 aaPredicted RBP18.77■□□□□ 0.6
SSRP1-204ENST00000529002 RFTN1Q14699 578 aaPredicted RBP18.77■□□□□ 0.6
SSRP1-204ENST00000529002 CAMK4Q16566 473 aa18.77■□□□□ 0.6
SSRP1-204ENST00000529002 C1QL3Q5VWW1 255 aa18.77■□□□□ 0.6
SSRP1-204ENST00000529002 LRRC66Q68CR7 880 aa18.77■□□□□ 0.6
SSRP1-204ENST00000529002 TICAM1Q8IUC6 712 aa18.77■□□□□ 0.6
SSRP1-204ENST00000529002 Q8NA96 180 aa18.77■□□□□ 0.6
SSRP1-204ENST00000529002 SPOCK2Q92563 424 aa18.77■□□□□ 0.6
SSRP1-204ENST00000529002 COX14Q96I36 57 aa18.77■□□□□ 0.6
SSRP1-204ENST00000529002 PEBP4Q96S96 227 aa18.77■□□□□ 0.6
SSRP1-204ENST00000529002 ACTL8Q9H568 366 aa18.77■□□□□ 0.6
SSRP1-204ENST00000529002 CPNE7Q9UBL6 633 aa18.77■□□□□ 0.6
SSRP1-204ENST00000529002 CROCCQ5TZA2 2017 aa18.77■□□□□ 0.6
SSRP1-204ENST00000529002 ARGFXA6NJG6 315 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 PSMD11O00231 422 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 EPHB6O15197 1021 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 SPAG6O75602 509 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 KRT38O76015 456 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 LDLRP01130 860 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 C9P02748 559 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 PDHA1P08559 390 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 RENBPP51606 427 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 PTSQ03393 145 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 LRP8Q14114 963 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 CLEC16AQ2KHT3 1053 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 TMCO4Q5TGY1 634 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 DNAJC24Q6P3W2 148 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 FAM199XQ6PEV8 388 aaPredicted RBP18.76■□□□□ 0.59
SSRP1-204ENST00000529002 LYSMD3Q7Z3D4 306 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 SLC9B2Q86UD5 537 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 PLXDC1Q8IUK5 500 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 SH3KBP1Q96B97 665 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 C19orf60Q96EN9 201 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 SCRN2Q96FV2 425 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 MCCC1Q96RQ3 725 aaPredicted RBP18.76■□□□□ 0.59
SSRP1-204ENST00000529002 NUDCD1Q96RS6 583 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 RIOK2Q9BVS4 552 aaKnown RBP18.76■□□□□ 0.59
SSRP1-204ENST00000529002 NLRC4Q9NPP4 1024 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 LHX9Q9NQ69 397 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 SCHIP1Q9P0W5 487 aaPredicted RBP18.76■□□□□ 0.59
SSRP1-204ENST00000529002 PADI1Q9ULC6 663 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 PCDHGA6Q9Y5G7 932 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 POLQO75417 2590 aa18.76■□□□□ 0.59
SSRP1-204ENST00000529002 WIPF3A6NGB9 483 aa18.75■□□□□ 0.59
SSRP1-204ENST00000529002 DAPK3O43293 454 aa18.75■□□□□ 0.59
SSRP1-204ENST00000529002 KRT86O43790 486 aa18.75■□□□□ 0.59
SSRP1-204ENST00000529002 SOCS5O75159 536 aa18.75■□□□□ 0.59
SSRP1-204ENST00000529002 PGLSO95336 258 aa18.75■□□□□ 0.59
SSRP1-204ENST00000529002 PEX11BO96011 259 aa18.75■□□□□ 0.59
SSRP1-204ENST00000529002 ZNF235Q14590 738 aa18.75■□□□□ 0.59
SSRP1-204ENST00000529002 RFX8Q6ZV50 586 aa18.75■□□□□ 0.59
SSRP1-204ENST00000529002 MON1BQ7L1V2 547 aa18.75■□□□□ 0.59
SSRP1-204ENST00000529002 PHF13Q86YI8 300 aaPredicted RBP18.75■□□□□ 0.59
SSRP1-204ENST00000529002 LZTR1Q8N653 840 aa18.75■□□□□ 0.59
SSRP1-204ENST00000529002 ARFGAP1Q8N6T3 406 aa18.75■□□□□ 0.59
SSRP1-204ENST00000529002 PIH1D2Q8WWB5 315 aa18.75■□□□□ 0.59
SSRP1-204ENST00000529002 PLEKHG4BQ96PX9 1271 aa18.75■□□□□ 0.59
SSRP1-204ENST00000529002 CNPY3Q9BT09 278 aa18.75■□□□□ 0.59
SSRP1-204ENST00000529002 SNRNP25Q9BV90 132 aaKnown RBP18.75■□□□□ 0.59
SSRP1-204ENST00000529002 STN1Q9H668 368 aaKnown RBP18.75■□□□□ 0.59
SSRP1-204ENST00000529002 MLXIPLQ9NP71 852 aa18.75■□□□□ 0.59
SSRP1-204ENST00000529002 IGSF5Q9NSI5 407 aa18.75■□□□□ 0.59
SSRP1-204ENST00000529002 PCSK1NQ9UHG2 260 aa18.75■□□□□ 0.59
SSRP1-204ENST00000529002 CNOT6Q9ULM6 557 aaKnown RBP18.75■□□□□ 0.59
SSRP1-204ENST00000529002 PIKFYVEQ9Y2I7 2098 aa18.75■□□□□ 0.59
SSRP1-204ENST00000529002 CALB1P05937 261 aa18.74■□□□□ 0.59
SSRP1-204ENST00000529002 CCNYL3P0C7X3 344 aa18.74■□□□□ 0.59
SSRP1-204ENST00000529002 F3P13726 295 aa18.74■□□□□ 0.59
SSRP1-204ENST00000529002 SOX5P35711 763 aa18.74■□□□□ 0.59
SSRP1-204ENST00000529002 GARSP41250 739 aaKnown RBP18.74■□□□□ 0.59
SSRP1-204ENST00000529002 AIF1P55008 147 aa18.74■□□□□ 0.59
SSRP1-204ENST00000529002 POLR2FP61218 127 aaKnown RBP18.74■□□□□ 0.59
SSRP1-204ENST00000529002 IL10RAQ13651 578 aa18.74■□□□□ 0.59
SSRP1-204ENST00000529002 PPP6R3Q5H9R7 873 aaPredicted RBP18.74■□□□□ 0.59
SSRP1-204ENST00000529002 PPP1R15BQ5SWA1 713 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms