RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 PDPK2PQ6A1A2 396 aa14.09□□□□□ -0.15
CAPN1-212ENST00000527887 DOK6Q6PKX4 331 aa14.09□□□□□ -0.15
CAPN1-212ENST00000527887 NT5DC3Q86UY8 548 aa14.09□□□□□ -0.15
CAPN1-212ENST00000527887 JAMLQ86YT9 394 aa14.09□□□□□ -0.15
CAPN1-212ENST00000527887 SFTPA2Q8IWL1 248 aa14.09□□□□□ -0.15
CAPN1-212ENST00000527887 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.09□□□□□ -0.15
CAPN1-212ENST00000527887 OR4D9Q8NGE8 314 aa14.09□□□□□ -0.15
CAPN1-212ENST00000527887 IMP4Q96G21 291 aaKnown RBP14.09□□□□□ -0.15
CAPN1-212ENST00000527887 OLFM3Q96PB7 478 aa14.09□□□□□ -0.15
CAPN1-212ENST00000527887 SLC25A51Q9H1U9 297 aa14.09□□□□□ -0.15
CAPN1-212ENST00000527887 SUDS3Q9H7L9 328 aaPredicted RBP14.09□□□□□ -0.15
CAPN1-212ENST00000527887 ZFYVE1Q9HBF4 777 aa14.09□□□□□ -0.15
CAPN1-212ENST00000527887 MAGEE1Q9HCI5 957 aa14.09□□□□□ -0.15
CAPN1-212ENST00000527887 SPTLC3Q9NUV7 552 aa14.09□□□□□ -0.15
CAPN1-212ENST00000527887 SEPT10Q9P0V9 454 aa14.09□□□□□ -0.15
CAPN1-212ENST00000527887 NFKBIL1Q9UBC1 381 aaPredicted RBP14.09□□□□□ -0.15
CAPN1-212ENST00000527887 PISDQ9UG56 409 aa14.09□□□□□ -0.15
CAPN1-212ENST00000527887 CNOT6Q9ULM6 557 aaKnown RBP14.09□□□□□ -0.15
CAPN1-212ENST00000527887 TMEM98Q9Y2Y6 226 aa14.09□□□□□ -0.15
CAPN1-212ENST00000527887 ST14Q9Y5Y6 855 aa14.09□□□□□ -0.15
CAPN1-212ENST00000527887 COL27A1Q8IZC6 1860 aaPredicted RBP14.09□□□□□ -0.15
CAPN1-212ENST00000527887 ATMQ13315 3056 aa14.09□□□□□ -0.15
CAPN1-212ENST00000527887 LRP4O75096 1905 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 A0A0U1RQS6 177 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 PMS2P1A4D2B8 440 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 OR5K4A6NMS3 321 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 MTSS1O43312 755 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 ZNF500O60304 480 aaPredicted RBP14.08□□□□□ -0.16
CAPN1-212ENST00000527887 LIPCP11150 499 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 CD1CP29017 333 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 LIMK2P53671 638 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 HADHBP55084 474 aaKnown RBP14.08□□□□□ -0.16
CAPN1-212ENST00000527887 DCDC1P59894 354 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 ZBTB17Q13105 803 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 AMZ1Q400G9 498 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 TEX44Q53QW1 395 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 TAF1BQ53T94 588 aaPredicted RBP14.08□□□□□ -0.16
CAPN1-212ENST00000527887 PHF19Q5T6S3 580 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 CCDC70Q6NSX1 233 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 XKR5Q6UX68 686 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 SFRP1Q8N474 314 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 AVL9Q8NBF6 648 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 PTCD2Q8WV60 388 aaKnown RBP14.08□□□□□ -0.16
CAPN1-212ENST00000527887 SH3KBP1Q96B97 665 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 TADA1Q96BN2 335 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 SMIM14Q96QK8 99 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 WDR24Q96S15 920 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 AGAP2Q99490 1192 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 CARD9Q9H257 536 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 KCNF1Q9H3M0 494 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 SEMA6CQ9H3T2 930 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 STN1Q9H668 368 aaKnown RBP14.08□□□□□ -0.16
CAPN1-212ENST00000527887 ZNHIT2Q9UHR6 403 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 PCDHB11Q9Y5F2 797 aa14.08□□□□□ -0.16
CAPN1-212ENST00000527887 GCN1Q92616 2671 aaKnown RBP14.08□□□□□ -0.16
CAPN1-212ENST00000527887 ANKRD36A6QL64 1941 aa14.07□□□□□ -0.16
CAPN1-212ENST00000527887 IGHV1OR21-1A0A087WYE8 117 aa14.07□□□□□ -0.16
CAPN1-212ENST00000527887 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.07□□□□□ -0.16
CAPN1-212ENST00000527887 PPM1DO15297 605 aa14.07□□□□□ -0.16
CAPN1-212ENST00000527887 INPP4BO15327 924 aa14.07□□□□□ -0.16
CAPN1-212ENST00000527887 ARHGAP6O43182 974 aa14.07□□□□□ -0.16
CAPN1-212ENST00000527887 PSTPIP1O43586 416 aa14.07□□□□□ -0.16
CAPN1-212ENST00000527887 SPOPO43791 374 aa14.07□□□□□ -0.16
CAPN1-212ENST00000527887 DNAJC6O75061 913 aa14.07□□□□□ -0.16
CAPN1-212ENST00000527887 KRT1P04264 644 aa14.07□□□□□ -0.16
CAPN1-212ENST00000527887 HGFP14210 728 aa14.07□□□□□ -0.16
CAPN1-212ENST00000527887 CLCNKAP51800 687 aa14.07□□□□□ -0.16
CAPN1-212ENST00000527887 CCZ1BP86790 482 aa14.07□□□□□ -0.16
CAPN1-212ENST00000527887 CCZ1P86791 482 aaPredicted RBP14.07□□□□□ -0.16
CAPN1-212ENST00000527887 CDK18Q07002 472 aa14.07□□□□□ -0.16
CAPN1-212ENST00000527887 TAZQ16635 292 aa14.07□□□□□ -0.16
CAPN1-212ENST00000527887 USP53Q70EK8 1073 aa14.07□□□□□ -0.16
CAPN1-212ENST00000527887 MARK2Q7KZI7 788 aaKnown RBP14.07□□□□□ -0.16
CAPN1-212ENST00000527887 TMC3Q7Z5M5 1100 aa14.07□□□□□ -0.16
CAPN1-212ENST00000527887 RFX6Q8HWS3 928 aa14.07□□□□□ -0.16
CAPN1-212ENST00000527887 AGAP3Q96P47 875 aa14.07□□□□□ -0.16
CAPN1-212ENST00000527887 TRIB3Q96RU7 358 aa14.07□□□□□ -0.16
CAPN1-212ENST00000527887 HERPUD2Q9BSE4 406 aa14.07□□□□□ -0.16
CAPN1-212ENST00000527887 ZSCAN5AQ9BUG6 496 aa14.07□□□□□ -0.16
CAPN1-212ENST00000527887 SARS2Q9NP81 518 aaKnown RBP14.07□□□□□ -0.16
CAPN1-212ENST00000527887 KCNK4Q9NYG8 393 aa14.07□□□□□ -0.16
CAPN1-212ENST00000527887 PCDHGA3Q9Y5H0 932 aa14.07□□□□□ -0.16
CAPN1-212ENST00000527887 IGHV5-10-1A0A0J9YXX1 117 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 NUAK1O60285 661 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 EPOP01588 193 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 CFHR1Q03591 330 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 TMEM71Q6P5X7 295 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 IYDQ6PHW0 289 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 ZNF574Q6ZN55 896 aaPredicted RBP14.06□□□□□ -0.16
CAPN1-212ENST00000527887 CHST15Q7LFX5 561 aaPredicted RBP14.06□□□□□ -0.16
CAPN1-212ENST00000527887 LYSMD3Q7Z3D4 306 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 TMPRSS9Q7Z410 1059 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 TRIM74Q86UV6 250 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 TMTC1Q8IUR5 882 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 CCDC170Q8IYT3 715 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 TRAM1L1Q8N609 369 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 AGBL5Q8NDL9 886 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 OR10G6Q8NH81 332 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 LRRN4Q8WUT4 740 aa14.06□□□□□ -0.16
CAPN1-212ENST00000527887 PATE1Q8WXA2 126 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms