RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 USP45Q70EL2 814 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 MAMDC2Q7Z304 686 aaPredicted RBP12.18□□□□□ -0.46
SRPRA-202ENST00000527817 TMEM135Q86UB9 458 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 RAVER1Q8IY67 606 aaKnown RBP12.18□□□□□ -0.46
SRPRA-202ENST00000527817 AVL9Q8NBF6 648 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 PIH1D2Q8WWB5 315 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 SEC14L1Q92503 715 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 SCAMP4Q969E2 229 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 STAMBPL1Q96FJ0 436 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 MCEEQ96PE7 176 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 HERPUD2Q9BSE4 406 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 DHX35Q9H5Z1 703 aaKnown RBP12.18□□□□□ -0.46
SRPRA-202ENST00000527817 UCK1Q9HA47 277 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 MLXIPLQ9NP71 852 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 GPATCH2LQ9NWQ4 482 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 VPS18Q9P253 973 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 CPNE7Q9UBL6 633 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 CNOT8Q9UFF9 292 aaKnown RBP12.18□□□□□ -0.46
SRPRA-202ENST00000527817 CD84Q9UIB8 345 aa12.18□□□□□ -0.46
SRPRA-202ENST00000527817 PCDHGA9Q9Y5G4 932 aaKnown RBP12.18□□□□□ -0.46
SRPRA-202ENST00000527817 OAS3Q9Y6K5 1087 aaKnown RBP12.18□□□□□ -0.46
SRPRA-202ENST00000527817 A1L4Q6 167 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 KIAA0754O94854 1291 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 SORBS2O94875 1100 aaKnown RBP12.17□□□□□ -0.46
SRPRA-202ENST00000527817 NDUFA10O95299 355 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 ASMTLO95671 621 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 PEX11BO96011 259 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 MT-ND3P03897 115 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 FGF5P12034 268 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 F3P13726 295 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 TNFAIP3P21580 790 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 DCTP40126 519 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 GARSP41250 739 aaKnown RBP12.17□□□□□ -0.46
SRPRA-202ENST00000527817 MAPK9P45984 424 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 ZNF135P52742 658 aaPredicted RBP12.17□□□□□ -0.46
SRPRA-202ENST00000527817 POLR2FP61218 127 aaKnown RBP12.17□□□□□ -0.46
SRPRA-202ENST00000527817 ZNF235Q14590 738 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 CAMK4Q16566 473 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 ARMC12Q5T9G4 340 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 PAPD7Q5XG87 772 aaKnown RBP12.17□□□□□ -0.46
SRPRA-202ENST00000527817 ZNF787Q6DD87 383 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 DCUN1D2Q6PH85 259 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 CHST15Q7LFX5 561 aaPredicted RBP12.17□□□□□ -0.46
SRPRA-202ENST00000527817 TRIM74Q86UV6 250 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 TICAM1Q8IUC6 712 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 NDUFAF2Q8N183 169 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 PGBD5Q8N414 524 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 NPWQ8N729 165 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 KCTD15Q96SI1 283 aaPredicted RBP12.17□□□□□ -0.46
SRPRA-202ENST00000527817 AGAP2Q99490 1192 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 MGME1Q9BQP7 344 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 TBC1D10AQ9BXI6 508 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 TRIM55Q9BYV6 548 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 RMI1Q9H9A7 625 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 OGFRQ9NZT2 677 aa12.17□□□□□ -0.46
SRPRA-202ENST00000527817 CNOT6Q9ULM6 557 aaKnown RBP12.17□□□□□ -0.46
SRPRA-202ENST00000527817 PCYT1BQ9Y5K3 369 aaPredicted RBP12.17□□□□□ -0.46
SRPRA-202ENST00000527817 TNRC6AQ8NDV7 1962 aaKnown RBP12.16□□□□□ -0.46
SRPRA-202ENST00000527817 C21orf140B9A014 251 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 SPAG6O75602 509 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 DNAJB5O75953 348 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 ZNF30P17039 623 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 CTPS1P17812 591 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 XRCC1P18887 633 aaPredicted RBP12.16□□□□□ -0.46
SRPRA-202ENST00000527817 VARSP26640 1264 aaKnown RBP12.16□□□□□ -0.46
SRPRA-202ENST00000527817 COL8A1P27658 744 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 CLCNKAP51800 687 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 PGDP52209 483 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 UBE2IP63279 158 aaKnown RBP12.16□□□□□ -0.46
SRPRA-202ENST00000527817 OGDHQ02218 1023 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 DNASE1L3Q13609 305 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 INPP5JQ15735 1006 aaPredicted RBP12.16□□□□□ -0.46
SRPRA-202ENST00000527817 EIF2S3LQ2VIR3 472 aaKnown RBP12.16□□□□□ -0.46
SRPRA-202ENST00000527817 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.16□□□□□ -0.46
SRPRA-202ENST00000527817 NADK2Q4G0N4 442 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 HSP90AA4PQ58FG1 418 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 LRRC66Q68CR7 880 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 PSTKQ8IV42 348 aaKnown RBP12.16□□□□□ -0.46
SRPRA-202ENST00000527817 RASGRP3Q8IV61 690 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 TP53INP2Q8IXH6 220 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 MCOLN2Q8IZK6 566 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 BBS5Q8N3I7 341 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 ARFGAP1Q8N6T3 406 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 FNIP1Q8TF40 1166 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 THAP4Q8WY91 577 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 OR6C1Q96RD1 312 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 SLC25A23Q9BV35 468 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 RIOK2Q9BVS4 552 aaKnown RBP12.16□□□□□ -0.46
SRPRA-202ENST00000527817 GPR87Q9BY21 358 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 LHX9Q9NQ69 397 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 CASS4Q9NQ75 786 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 PRKAB1Q9Y478 270 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 PCDHGB7Q9Y5F8 929 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 POLQO75417 2590 aa12.16□□□□□ -0.46
SRPRA-202ENST00000527817 A0A0U1RQS6 177 aa12.15□□□□□ -0.46
SRPRA-202ENST00000527817 FZD6O60353 706 aa12.15□□□□□ -0.46
SRPRA-202ENST00000527817 SNX2O60749 519 aa12.15□□□□□ -0.46
SRPRA-202ENST00000527817 UBXN7O94888 489 aa12.15□□□□□ -0.46
SRPRA-202ENST00000527817 ATP1A1P05023 1023 aaKnown RBP12.15□□□□□ -0.46
SRPRA-202ENST00000527817 PDHA1P08559 390 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms