RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 FAM25AB3EWG3 89 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 FAM25CB3EWG5 89 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 FAM25GB3EWG6 89 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 PSMD11O00231 422 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 TRIM38O00635 465 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 RASGRF2O14827 1237 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 AKAP10O43572 662 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 BUD23O43709 281 aaKnown RBP3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 PLA2G6O60733 806 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 TOM1O60784 492 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 SRGAP2O75044 1071 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 PHF2O75151 1096 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 FKBP6O75344 327 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 PSIP1O75475 530 aaKnown RBP3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 CSDE1O75534 798 aaKnown RBP3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 SERPINI2O75830 405 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 MYO1DO94832 1006 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 HEXIM1O94992 359 aaKnown RBP3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 CCNDBP1O95273 360 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 CHRNA1P02708 482 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 PGK2P07205 417 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 HEXBP07686 556 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 NUDT17P0C025 328 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 TSPY3P0CV98 308 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 TSPY8P0CW00 308 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 DBTP11182 482 aaKnown RBP3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 ANPEPP15144 967 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 PDGFRAP16234 1089 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 ZNF23P17027 643 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 WT1P19544 449 aaPredicted RBP3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 PSMA2P25787 234 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 EEF1GP26641 437 aaKnown RBP3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 PON1P27169 355 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 EPHB2P29323 1055 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 CDH5P33151 784 aaPredicted RBP3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 RFC4P35249 363 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 RFC1P35251 1148 aaPredicted RBP3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 STT3AP46977 705 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 NPTX2P47972 431 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 STARP49675 285 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 SLC12A2P55011 1212 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 CDK16Q00536 496 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 PLIN5Q00G26 463 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 GALK2Q01415 458 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 TSPY1Q01534 308 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 LRRC63Q05C16 580 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 PPARAQ07869 468 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 CD300CQ08708 224 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 RBL2Q08999 1139 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 ATP1A4Q13733 1029 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 FRG1Q14331 258 aaKnown RBP3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 DMC1Q14565 340 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 SLC39A14Q15043 492 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 NCF4Q15080 339 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 SLC15A2Q16348 729 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 SRSF7Q16629 238 aaKnown RBP eCLIP3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 CYP2A13Q16696 494 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 GEN1Q17RS7 908 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 GTDC1Q4AE62 458 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 CEP55Q53EZ4 464 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 C2orf27AQ580R0 203 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 TDRD12Q587J7 1177 aaKnown RBP3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 ACSBG2Q5FVE4 666 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 EARS2Q5JPH6 523 aaKnown RBP3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 KRBOX4Q5JUW0 171 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 BRMS1LQ5PSV4 323 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 FAM109BQ6ICB4 259 aaPredicted RBP3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 AAGABQ6PD74 315 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 SHQ1Q6PI26 577 aaKnown RBP3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 MED25Q71SY5 747 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 CYB5R4Q7L1T6 521 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 TMPRSS9Q7Z410 1059 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 ARPINQ7Z6K5 226 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 TTC7BQ86TV6 843 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 JAZF1Q86VZ6 243 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 VSIG1Q86XK7 387 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 LYSMD2Q8IV50 215 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 ADGRF2Q8IZF7 708 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 LNX2Q8N448 690 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 EFHBQ8N7U6 833 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 DNAAF3Q8N9W5 541 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 CATSPER1Q8NEC5 780 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 OR52K1Q8NGK4 314 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 HASPINQ8TF76 798 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 CASKIN2Q8WXE0 1202 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 STON2Q8WXE9 905 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 MARC2Q969Z3 335 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 ATP6V1E2Q96A05 226 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 RAB7BQ96AH8 199 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 SARAFQ96BY9 339 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 RNF31Q96EP0 1072 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 PTCD3Q96EY7 689 aaKnown RBP3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 PDXPQ96GD0 296 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 FUBP3Q96I24 572 aaKnown RBP eCLIP3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 B3GALT6Q96L58 329 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 AK8Q96MA6 479 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 C7orf25Q9BPX7 421 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 KIFC3Q9BVG8 833 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 AP1M1Q9BXS5 423 aa3.72□□□□□ -1.81
CLNS1A-209ENST00000527299 LSG1Q9H089 658 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms