RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 KLK10O43240 276 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 PMPCBO75439 489 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 ASMTLO95671 621 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 PYGLP06737 847 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 CD1CP29017 333 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 ETV5P41161 510 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 ACTR1BP42025 376 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 NR2C2P49116 596 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 ACTR1AP61163 376 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 CLN3Q13286 438 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 TFDP2Q14188 446 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 NOMO1Q15155 1222 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 AMZ1Q400G9 498 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 NKAIN2Q5VXU1 208 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 ALS2CLQ60I27 953 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 C11orf63Q6NUN7 778 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 PCSK4Q6UW60 755 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 RAD9BQ6WBX8 426 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 CCDC170Q8IYT3 715 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 FBXO39Q8N4B4 442 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 TFB1MQ8WVM0 346 aaKnown RBP10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 KCNE4Q8WWG9 221 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 HAUS1Q96CS2 278 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 FCRL3Q96P31 734 aaPredicted RBP10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 PANX2Q96RD6 677 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 NUDT22Q9BRQ3 303 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 ADGRE3Q9BY15 652 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 ZFYVE1Q9HBF4 777 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 RDH14Q9HBH5 336 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 CPNE5Q9HCH3 593 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 MAGEE1Q9HCI5 957 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 HAUS2Q9NVX0 235 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 PKD2L2Q9NZM6 624 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 TMPRSS11EQ9UL52 423 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 ZNF711Q9Y462 761 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 LOXL2Q9Y4K0 774 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 ADGRG1Q9Y653 693 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 MGAQ8IWI9 3026 aa10.35□□□□□ -0.75
PRPF40B-204ENST00000527253 ZFC3H1O60293 1989 aaKnown RBP10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 A0A0A6YYK5 440 aaPredicted RBP10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 LOC285095A0A1B0GVY8 99 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 A6NCN8 305 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 RHPN2P1A8MT19 583 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 F5H423 210 aaPredicted RBP10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 ZRANB2O95218 330 aaKnown RBP eCLIP10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 NDUFA10O95299 355 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 NDST3O95803 873 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 ITGA2BP08514 1039 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 ZNF8P17098 575 aaPredicted RBP10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 ITIH1P19827 911 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 NFKB1P19838 968 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 ALDH4A1P30038 563 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 SLC5A2P31639 672 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 CA5AP35218 305 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 CHRNA4P43681 627 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 CXADRP78310 365 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 COL9A2Q14055 689 aaPredicted RBP10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 C16orf72Q14CZ0 275 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 SLC14A2Q15849 920 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 TFDP3Q5H9I0 405 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 ADGRG6Q86SQ4 1221 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 ZC3H18Q86VM9 953 aaKnown RBP10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 ZNF761Q86XN6 746 aaPredicted RBP10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 GALNT13Q8IUC8 556 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 RCOR2Q8IZ40 523 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 ZNF567Q8N184 647 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 CCHCR1Q8TD31 782 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 OXNAD1Q96HP4 312 aaPredicted RBP10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 MRFAP1L1Q96HT8 127 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 TMEM74Q96NL1 305 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 GORASP1Q9BQQ3 440 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 HEMGNQ9BXL5 484 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 LACRTQ9GZZ8 138 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 CDH19Q9H159 772 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 TMEM9Q9P0T7 183 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 VPS18Q9P253 973 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 ATXN10Q9UBB4 475 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 TBC1D29Q9UFV1 150 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 PISDQ9UG56 409 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 ZNHIT2Q9UHR6 403 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 KCNK6Q9Y257 313 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 EPN1Q9Y6I3 576 aaPredicted RBP10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 BAHCC1Q9P281 2608 aa10.34□□□□□ -0.75
PRPF40B-204ENST00000527253 LOC400499M0QZD8 3231 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 IGHV1OR21-1A0A087WYE8 117 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 IGHV5-10-1A0A0J9YXX1 117 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 TMX2-CTNND1H3BSU7 103 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 EFSO43281 561 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 NUAK1O60285 661 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 CPNE6O95741 557 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 SLC4A1P02730 911 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 CCL4P13236 92 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 ACP5P13686 325 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 BPIP17213 487 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 CSF2RBP32927 897 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 CTNNA1P35221 906 aaKnown RBP10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 CYLC1P35663 651 aaPredicted RBP10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 MLLT3P42568 568 aaPredicted RBP10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 WNT3AP56704 352 aa10.33□□□□□ -0.76
PRPF40B-204ENST00000527253 SRSF6Q13247 344 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms