RNA–Protein interactions for RNA: ENST00000526308.2

PCDHB18P-202, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 3,197 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-202ENST00000526308 SCAMP5Q8TAC9 235 aa13.69□□□□□ -0.22
PCDHB18P-202ENST00000526308 RAB2BQ8WUD1 216 aa13.69□□□□□ -0.22
PCDHB18P-202ENST00000526308 SGCDQ92629 289 aa13.69□□□□□ -0.22
PCDHB18P-202ENST00000526308 PGAP3Q96FM1 320 aaPredicted RBP13.69□□□□□ -0.22
PCDHB18P-202ENST00000526308 TBATAQ96M53 351 aa13.69□□□□□ -0.22
PCDHB18P-202ENST00000526308 PPM1MQ96MI6 270 aa13.69□□□□□ -0.22
PCDHB18P-202ENST00000526308 TUBB1Q9H4B7 451 aa13.69□□□□□ -0.22
PCDHB18P-202ENST00000526308 INTS7Q9NVH2 962 aaKnown RBP13.69□□□□□ -0.22
PCDHB18P-202ENST00000526308 PCDHA9Q9Y5H5 950 aa13.69□□□□□ -0.22
PCDHB18P-202ENST00000526308 TOR1BO14657 336 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 CACNG3O60359 315 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 SNX2O60749 519 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 SLC22A3O75751 556 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 CYBBP04839 570 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 C7P10643 843 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 KCNE1P15382 129 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 TMBIM6P55061 237 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 DSC2Q02487 901 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 OR4D1Q15615 310 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 R3HCC1LQ7Z5L2 792 aaKnown RBP13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 FBXO39Q8N4B4 442 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 ZNF513Q8N8E2 541 aaPredicted RBP13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 OR13J1Q8NGT2 312 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 PNPT1Q8TCS8 783 aaKnown RBP13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 CHPT1Q8WUD6 406 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 TRUB1Q8WWH5 349 aaKnown RBP13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 PPP1R2P1Q96PQ5 205 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 FNDC3AQ9Y2H6 1198 aaKnown RBP13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 SNX5Q9Y5X3 404 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 KDM1AO60341 852 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 ADAM23O75077 832 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 DEAF1O75398 565 aaPredicted RBP13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 GLP2RO95838 553 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 S1PR4O95977 384 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 SHMT2P34897 504 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 IREB2P48200 963 aaKnown RBP13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 LHX1P48742 406 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 CRTC3Q6UUV7 619 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 IGFN1Q86VF2 1251 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 C8orf59Q8N0T1 100 aaPredicted RBP13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 ASB2Q96Q27 587 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 TUBA1CQ9BQE3 449 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 ERGIC3Q9Y282 383 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 ST14Q9Y5Y6 855 aa13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 ZFC3H1O60293 1989 aaKnown RBP13.68□□□□□ -0.22
PCDHB18P-202ENST00000526308 A0A1B0GTL3 188 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 CASTOR2A6NHX0 329 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 TTC36A6NLP5 189 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 ZBBXA8MT70 800 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 KPNA4O00629 521 aaPredicted RBP13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 TNPO2O14787 897 aaKnown RBP13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 MAN1A2O60476 641 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 MMP3P08254 477 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 MYL3P08590 195 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 THRBP10828 461 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 CD1DP15813 335 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 ARSFP54793 590 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 CLCQ05315 142 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 ZNF33AQ06730 810 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 CD300CQ08708 224 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 SPIDRQ14159 915 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 SNX17Q15036 470 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 PYCR3Q53H96 274 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 DPP9Q86TI2 863 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 FNDC5Q8NAU1 212 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 ITFG1Q8TB96 612 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 DPF3Q92784 378 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 TMBIM1Q969X1 311 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 MYLPFQ96A32 169 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 ESAMQ96AP7 390 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 ACOX2Q99424 681 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 NEURL2Q9BR09 285 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 NANOGQ9H9S0 305 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 SP110Q9HB58 689 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 LEF1Q9UJU2 399 aaPredicted RBP13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 PPP2R3BQ9Y5P8 575 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 OAS3Q9Y6K5 1087 aaKnown RBP13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 TMEM247A6NEH6 219 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 RRN3P2A6NIE6 340 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 C16orf96A6NNT2 1141 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 TBC1D4O60343 1298 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 C1RP00736 705 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 INHBBP09529 407 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 UMPSP11172 480 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 POLR2JP52435 117 aaKnown RBP13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 OR4D2P58180 307 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 MTPNP58546 118 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 GSTM4Q03013 218 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 CHRNB3Q05901 458 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 PPP1R8Q12972 351 aaKnown RBP13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 MARC1Q5VT66 337 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 PIWIL3Q7Z3Z3 882 aaKnown RBP13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 THAP5Q7Z6K1 395 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 ZDHHC13Q8IUH4 622 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 GOLM1Q8NBJ4 401 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 YTHDF1Q9BYJ9 559 aaKnown RBP13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 VTA1Q9NP79 307 aa13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 UXTQ9UBK9 157 aaPredicted RBP13.67□□□□□ -0.22
PCDHB18P-202ENST00000526308 TSR3Q9UJK0 312 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms