RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 NTN3O00634 580 aaPredicted RBP16.87■□□□□ 0.29
CCS-203ENST00000526058 BRINP1O60477 761 aa16.87■□□□□ 0.29
CCS-203ENST00000526058 DNAJC6O75061 913 aa16.87■□□□□ 0.29
CCS-203ENST00000526058 TJP3O95049 919 aa16.87■□□□□ 0.29
CCS-203ENST00000526058 MPOP05164 745 aa16.87■□□□□ 0.29
CCS-203ENST00000526058 RBP3P10745 1247 aa16.87■□□□□ 0.29
CCS-203ENST00000526058 BPIP17213 487 aa16.87■□□□□ 0.29
CCS-203ENST00000526058 CETN2P41208 172 aa16.87■□□□□ 0.29
CCS-203ENST00000526058 PDX1P52945 283 aa16.87■□□□□ 0.29
CCS-203ENST00000526058 GSDMDP57764 484 aa16.87■□□□□ 0.29
CCS-203ENST00000526058 CERCAMQ5T4B2 595 aa16.87■□□□□ 0.29
CCS-203ENST00000526058 ZNF648Q5T619 568 aaPredicted RBP16.87■□□□□ 0.29
CCS-203ENST00000526058 UBL4BQ8N7F7 174 aa16.87■□□□□ 0.29
CCS-203ENST00000526058 Q8N9G6 341 aaPredicted RBP16.87■□□□□ 0.29
CCS-203ENST00000526058 OR6C4Q8NGE1 309 aa16.87■□□□□ 0.29
CCS-203ENST00000526058 ZDHHC1Q8WTX9 485 aa16.87■□□□□ 0.29
CCS-203ENST00000526058 PATE1Q8WXA2 126 aa16.87■□□□□ 0.29
CCS-203ENST00000526058 ATXN7L3BQ96GX2 97 aa16.87■□□□□ 0.29
CCS-203ENST00000526058 OR2M4Q96R27 311 aa16.87■□□□□ 0.29
CCS-203ENST00000526058 SPATA16Q9BXB7 569 aa16.87■□□□□ 0.29
CCS-203ENST00000526058 BPIFA1Q9NP55 256 aa16.87■□□□□ 0.29
CCS-203ENST00000526058 ARFGAP3Q9NP61 516 aa16.87■□□□□ 0.29
CCS-203ENST00000526058 LRIT1Q9P2V4 623 aa16.87■□□□□ 0.29
CCS-203ENST00000526058 ZNHIT2Q9UHR6 403 aa16.87■□□□□ 0.29
CCS-203ENST00000526058 PRKAB1Q9Y478 270 aa16.87■□□□□ 0.29
CCS-203ENST00000526058 ENTPD2Q9Y5L3 495 aa16.87■□□□□ 0.29
CCS-203ENST00000526058 A0A1W2PQM1 296 aa16.86■□□□□ 0.29
CCS-203ENST00000526058 MIF4GDA9UHW6 222 aaKnown RBP16.86■□□□□ 0.29
CCS-203ENST00000526058 KCNN4O15554 427 aa16.86■□□□□ 0.29
CCS-203ENST00000526058 TCEA3O75764 348 aa16.86■□□□□ 0.29
CCS-203ENST00000526058 ECEL1O95672 775 aa16.86■□□□□ 0.29
CCS-203ENST00000526058 EPOP01588 193 aa16.86■□□□□ 0.29
CCS-203ENST00000526058 RPLP0P05388 317 aaKnown RBP16.86■□□□□ 0.29
CCS-203ENST00000526058 GLB1P16278 677 aa16.86■□□□□ 0.29
CCS-203ENST00000526058 ACTR1BP42025 376 aa16.86■□□□□ 0.29
CCS-203ENST00000526058 MAZP56270 477 aaKnown RBP16.86■□□□□ 0.29
CCS-203ENST00000526058 ACTR1AP61163 376 aa16.86■□□□□ 0.29
CCS-203ENST00000526058 MPP3Q13368 585 aa16.86■□□□□ 0.29
CCS-203ENST00000526058 SPIDRQ14159 915 aa16.86■□□□□ 0.29
CCS-203ENST00000526058 SLC1A5Q15758 541 aa16.86■□□□□ 0.29
CCS-203ENST00000526058 DARS2Q6PI48 645 aaKnown RBP16.86■□□□□ 0.29
CCS-203ENST00000526058 C17orf82Q86X59 251 aaPredicted RBP16.86■□□□□ 0.29
CCS-203ENST00000526058 GALNT13Q8IUC8 556 aa16.86■□□□□ 0.29
CCS-203ENST00000526058 CDKL3Q8IVW4 592 aaPredicted RBP16.86■□□□□ 0.29
CCS-203ENST00000526058 WDR48Q8TAF3 677 aa16.86■□□□□ 0.29
CCS-203ENST00000526058 CDH19Q9H159 772 aa16.86■□□□□ 0.29
CCS-203ENST00000526058 GBA3Q9H227 469 aa16.86■□□□□ 0.29
CCS-203ENST00000526058 VPS18Q9P253 973 aa16.86■□□□□ 0.29
CCS-203ENST00000526058 APPL1Q9UKG1 709 aa16.86■□□□□ 0.29
CCS-203ENST00000526058 FAM208BQ5VWN6 2430 aa16.86■□□□□ 0.29
CCS-203ENST00000526058 A0A1W2PNU3 283 aaPredicted RBP16.85■□□□□ 0.29
CCS-203ENST00000526058 TLX3O43711 291 aaPredicted RBP16.85■□□□□ 0.29
CCS-203ENST00000526058 AGTP01019 485 aa16.85■□□□□ 0.29
CCS-203ENST00000526058 DCDC1P59894 354 aa16.85■□□□□ 0.29
CCS-203ENST00000526058 GABREP78334 506 aa16.85■□□□□ 0.29
CCS-203ENST00000526058 OLIG2Q13516 323 aa16.85■□□□□ 0.29
CCS-203ENST00000526058 ZNF569Q5MCW4 686 aa16.85■□□□□ 0.29
CCS-203ENST00000526058 ANKRD20A2Q5SQ80 823 aa16.85■□□□□ 0.29
CCS-203ENST00000526058 ANKRD20A1Q5TYW2 823 aa16.85■□□□□ 0.29
CCS-203ENST00000526058 ANKRD20A3Q5VUR7 823 aa16.85■□□□□ 0.29
CCS-203ENST00000526058 NAGSQ8N159 534 aa16.85■□□□□ 0.29
CCS-203ENST00000526058 ARL14Q8N4G2 192 aa16.85■□□□□ 0.29
CCS-203ENST00000526058 TTC30BQ8N4P2 665 aa16.85■□□□□ 0.29
CCS-203ENST00000526058 RNF10Q8N5U6 811 aaKnown RBP16.85■□□□□ 0.29
CCS-203ENST00000526058 TRAM1L1Q8N609 369 aa16.85■□□□□ 0.29
CCS-203ENST00000526058 CCDC110Q8TBZ0 833 aa16.85■□□□□ 0.29
CCS-203ENST00000526058 HES6Q96HZ4 224 aa16.85■□□□□ 0.29
CCS-203ENST00000526058 GFM1Q96RP9 751 aaKnown RBP16.85■□□□□ 0.29
CCS-203ENST00000526058 SRPK1Q96SB4 655 aaKnown RBP16.85■□□□□ 0.29
CCS-203ENST00000526058 ZSCAN5AQ9BUG6 496 aa16.85■□□□□ 0.29
CCS-203ENST00000526058 LRRN3Q9H3W5 708 aa16.85■□□□□ 0.29
CCS-203ENST00000526058 RAD18Q9NS91 495 aa16.85■□□□□ 0.29
CCS-203ENST00000526058 ATXN10Q9UBB4 475 aa16.85■□□□□ 0.29
CCS-203ENST00000526058 NFKBIL1Q9UBC1 381 aaPredicted RBP16.85■□□□□ 0.29
CCS-203ENST00000526058 GUCA1BQ9UMX6 200 aa16.85■□□□□ 0.29
CCS-203ENST00000526058 ADAMTS20P59510 1910 aa16.85■□□□□ 0.29
CCS-203ENST00000526058 TCRBV7S2A1N4TA0A589 114 aa16.84■□□□□ 0.29
CCS-203ENST00000526058 NUDT21O43809 227 aaKnown RBP16.84■□□□□ 0.29
CCS-203ENST00000526058 SLC25A14O95258 325 aaPredicted RBP16.84■□□□□ 0.29
CCS-203ENST00000526058 PTMAP06454 111 aaKnown RBP16.84■□□□□ 0.29
CCS-203ENST00000526058 PNLIPP16233 465 aa16.84■□□□□ 0.29
CCS-203ENST00000526058 ZNF8P17098 575 aaPredicted RBP16.84■□□□□ 0.29
CCS-203ENST00000526058 PSMB4P28070 264 aa16.84■□□□□ 0.29
CCS-203ENST00000526058 HMGCLP35914 325 aa16.84■□□□□ 0.29
CCS-203ENST00000526058 TNNT3P45378 269 aaPredicted RBP16.84■□□□□ 0.29
CCS-203ENST00000526058 C3orf38Q5JPI3 329 aa16.84■□□□□ 0.29
CCS-203ENST00000526058 ITPRIPL1Q6GPH6 555 aa16.84■□□□□ 0.29
CCS-203ENST00000526058 C19orf48Q6RUI8 117 aa16.84■□□□□ 0.29
CCS-203ENST00000526058 CHST15Q7LFX5 561 aaPredicted RBP16.84■□□□□ 0.29
CCS-203ENST00000526058 SPRED1Q7Z699 444 aa16.84■□□□□ 0.29
CCS-203ENST00000526058 B3GNT8Q7Z7M8 397 aa16.84■□□□□ 0.29
CCS-203ENST00000526058 CCNJLQ8IV13 435 aa16.84■□□□□ 0.29
CCS-203ENST00000526058 BLOC1S5Q8TDH9 187 aa16.84■□□□□ 0.29
CCS-203ENST00000526058 FERMT1Q9BQL6 677 aa16.84■□□□□ 0.29
CCS-203ENST00000526058 FICDQ9BVA6 458 aa16.84■□□□□ 0.29
CCS-203ENST00000526058 FSD1LQ9BXM9 530 aa16.84■□□□□ 0.29
CCS-203ENST00000526058 OR2AG1Q9H205 316 aa16.84■□□□□ 0.29
CCS-203ENST00000526058 RALYQ9UKM9 306 aaKnown RBP16.84■□□□□ 0.29
CCS-203ENST00000526058 ATXN7L1Q9ULK2 861 aaPredicted RBP16.84■□□□□ 0.29
CCS-203ENST00000526058 SATB2Q9UPW6 733 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms