RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 FSTL5Q8N475 847 aaPredicted RBP10.11□□□□□ -0.79
VPS28-204ENST00000526054 ARL10Q8N8L6 244 aa10.11□□□□□ -0.79
VPS28-204ENST00000526054 CCDC89Q8N998 374 aa10.11□□□□□ -0.79
VPS28-204ENST00000526054 IPMKQ8NFU5 416 aa10.11□□□□□ -0.79
VPS28-204ENST00000526054 WDR48Q8TAF3 677 aa10.11□□□□□ -0.79
VPS28-204ENST00000526054 COG1Q8WTW3 980 aa10.11□□□□□ -0.79
VPS28-204ENST00000526054 RTP4Q96DX8 246 aa10.11□□□□□ -0.79
VPS28-204ENST00000526054 OXNAD1Q96HP4 312 aaPredicted RBP10.11□□□□□ -0.79
VPS28-204ENST00000526054 SRPK1Q96SB4 655 aaKnown RBP10.11□□□□□ -0.79
VPS28-204ENST00000526054 CCDC3Q9BQI4 270 aa10.11□□□□□ -0.79
VPS28-204ENST00000526054 MLPHQ9BV36 600 aaPredicted RBP10.11□□□□□ -0.79
VPS28-204ENST00000526054 DPH1Q9BZG8 443 aa10.11□□□□□ -0.79
VPS28-204ENST00000526054 MBNL1Q9NR56 388 aaKnown RBP10.11□□□□□ -0.79
VPS28-204ENST00000526054 KCTD5Q9NXV2 234 aa10.11□□□□□ -0.79
VPS28-204ENST00000526054 UBP1Q9NZI7 540 aa10.11□□□□□ -0.79
VPS28-204ENST00000526054 DRG1Q9Y295 367 aaKnown RBP10.11□□□□□ -0.79
VPS28-204ENST00000526054 PCDHGA8Q9Y5G5 932 aa10.11□□□□□ -0.79
VPS28-204ENST00000526054 SAR1BQ9Y6B6 198 aa10.11□□□□□ -0.79
VPS28-204ENST00000526054 ATMQ13315 3056 aa10.11□□□□□ -0.79
VPS28-204ENST00000526054 FLNBO75369 2602 aaKnown RBP10.1□□□□□ -0.79
VPS28-204ENST00000526054 CFAP46Q8IYW2 2715 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 A0A1W2PNU3 283 aaPredicted RBP10.1□□□□□ -0.79
VPS28-204ENST00000526054 NPIPB15A6NHN6 443 aaPredicted RBP10.1□□□□□ -0.79
VPS28-204ENST00000526054 A8MX80 341 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 ANKRD66B4E2M5 251 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 PRLP01236 227 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 EPOP01588 193 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 FGF1P05230 155 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 CELA2BP08218 269 aaPredicted RBP10.1□□□□□ -0.79
VPS28-204ENST00000526054 ALPIP09923 528 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 PLA2G2AP14555 144 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 ZNF30P17039 623 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 HLA-DPA1P20036 260 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 HTR1BP28222 390 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 CASQ1P31415 396 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 FDFT1P37268 417 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 PDX1P52945 283 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 ETF1P62495 437 aaKnown RBP10.1□□□□□ -0.79
VPS28-204ENST00000526054 CFHR1Q03591 330 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 LRRC14Q15048 493 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 ACOX1Q15067 660 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 AGERQ15109 404 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 ELOCQ15369 112 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 TCEA2Q15560 299 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 CNGA3Q16281 694 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 PARP6Q2NL67 630 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 PCSK4Q6UW60 755 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 LIPIQ6XZB0 460 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 GSTA5Q7RTV2 222 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 KDELC2Q7Z4H8 507 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 HID1Q8IV36 788 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 ARL14Q8N4G2 192 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 PRELID2Q8N945 189 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 KYQ8NBH2 561 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 SCG3Q8WXD2 468 aaKnown RBP10.1□□□□□ -0.79
VPS28-204ENST00000526054 CCDC97Q96F63 343 aaPredicted RBP10.1□□□□□ -0.79
VPS28-204ENST00000526054 MS4A14Q96JA4 679 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 MRGPRX2Q96LB1 330 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 SLC46A1Q96NT5 459 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 TRIB3Q96RU7 358 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 LYSMD1Q96S90 227 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 CLPBQ9H078 707 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 SIRPGQ9P1W8 387 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 PAK5Q9P286 719 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 PADI4Q9UM07 663 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 COQ6Q9Y2Z9 468 aa10.1□□□□□ -0.79
VPS28-204ENST00000526054 SCN8AQ9UQD0 1980 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 CCDC187A0A096LP49 1063 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 C1orf232A0A0U1RR37 186 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 LOC285095A0A1B0GVY8 99 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 PMS2P1A4D2B8 440 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 CDRT15L2A8MXV6 281 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 KIF2AO00139 706 aaPredicted RBP10.09□□□□□ -0.79
VPS28-204ENST00000526054 ZNF185O15231 689 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 YY2O15391 372 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 PSMD3O43242 534 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 PHF2O75151 1096 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 RECQL5O94762 991 aaPredicted RBP10.09□□□□□ -0.79
VPS28-204ENST00000526054 RASGRP1O95267 797 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 ZIC2O95409 532 aaPredicted RBP10.09□□□□□ -0.79
VPS28-204ENST00000526054 PCCBP05166 539 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 CTSEP14091 401 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 LHCGRP22888 699 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 MLLT3P42568 568 aaPredicted RBP10.09□□□□□ -0.79
VPS28-204ENST00000526054 PAFAH1B1P43034 410 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 HK3P52790 923 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 VAC14Q08AM6 782 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 NFATC4Q14934 902 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 ALG11Q2TAA5 492 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 LRRC66Q68CR7 880 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 DENND2CQ68D51 928 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 C4orf22Q6V702 233 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 RD3Q7Z3Z2 195 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 ZNF605Q86T29 641 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 TSPAN33Q86UF1 283 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 RAVER1Q8IY67 606 aaKnown RBP10.09□□□□□ -0.79
VPS28-204ENST00000526054 ATL2Q8NHH9 583 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 WDR36Q8NI36 951 aaKnown RBP10.09□□□□□ -0.79
VPS28-204ENST00000526054 CCHCR1Q8TD31 782 aa10.09□□□□□ -0.79
VPS28-204ENST00000526054 MAGOHBQ96A72 148 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms