RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 STILQ15468 1287 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 KCNA10Q16322 511 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 SMTNL2Q2TAL5 461 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 PCGF3Q3KNV8 242 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 TMEM196Q5HYL7 178 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 GCNT6Q5T4J0 391 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 STRIP1Q5VSL9 837 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 PRAMEF8Q5VWM4 474 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 AFMIDQ63HM1 303 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 KRT39Q6A163 491 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 TBC1D3GQ6DHY5 549 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 SULT1C3Q6IMI6 304 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 TBC1D3CQ6IPX1 549 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 NAPEPLDQ6IQ20 393 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 CDPF1Q6NVV7 123 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 C17orf99Q6UX52 265 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 MACC1Q6ZN28 852 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 ACAD11Q709F0 780 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 PRSS42Q7Z5A4 293 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 FRMD5Q7Z6J6 570 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 ADAMTSL2Q86TH1 951 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 DCP2Q8IU60 420 aaKnown RBP4.48□□□□□ -1.69
CD44-213ENST00000525209 SIAH3Q8IW03 269 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 SLC15A3Q8IY34 581 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 TBC1D3Q8IZP1 549 aaPredicted RBP4.48□□□□□ -1.69
CD44-213ENST00000525209 SLC7A5P1Q8MH63 180 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 TMEM130Q8N3G9 435 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 LEMD2Q8NC56 503 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 TRIM58Q8NG06 486 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 NCOA7Q8NI08 942 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 SLC26A7Q8TE54 656 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 KAT2BQ92831 832 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 DTD2Q96FN9 168 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 MSANTD3Q96H12 275 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 ART5Q96L15 291 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 CDRT15Q96T59 188 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 MYOCQ99972 504 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 GORASP1Q9BQQ3 440 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 JPH2Q9BR39 696 aaPredicted RBP4.48□□□□□ -1.69
CD44-213ENST00000525209 NDC1Q9BTX1 674 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 C1QTNF1Q9BXJ1 281 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 IFIH1Q9BYX4 1025 aaKnown RBP4.48□□□□□ -1.69
CD44-213ENST00000525209 MRPL37Q9BZE1 423 aaKnown RBP4.48□□□□□ -1.69
CD44-213ENST00000525209 TRPV6Q9H1D0 765 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 MMP27Q9H306 513 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 NOL11Q9H8H0 719 aaKnown RBP4.48□□□□□ -1.69
CD44-213ENST00000525209 GPR108Q9NPR9 543 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 THEGQ9P2T0 379 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 MAGEL2Q9UJ55 1249 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 SNX7Q9UNH6 387 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 SLC12A4Q9UP95 1085 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 CMAHPQ9Y471 501 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.48□□□□□ -1.69
CD44-213ENST00000525209 AP4B1Q9Y6B7 739 aa4.48□□□□□ -1.69
CD44-213ENST00000525209 PHLPP2Q6ZVD8 1323 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 CD109Q6YHK3 1445 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 ZCCHC11Q5TAX3 1644 aaKnown RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 A0A075B6Q4 140 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 A0A0U1RQS6 177 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 C13orf42A0A1B0GVH6 325 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 A0A1W2PQ45 241 aaPredicted RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 A0A1W2PQY0 241 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 TCRBV7S2A1N4TA0A589 114 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 LNP1A1A4G5 178 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 TARSL2A2RTX5 802 aaKnown RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 C2orf78A6NCI8 922 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 ZNF839A8K0R7 811 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 FADS2P1A8MWK0 482 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 PRRG1O14668 218 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 HS3ST1O14792 307 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 DCLK1O15075 740 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 KIAA0391O15091 583 aaKnown RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 NKX2-8O15522 239 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 SELENOFO60613 162 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 KLHL18O94889 574 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 KAT7O95251 611 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 CXCL14O95715 111 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 IGHEP01854 428 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 CHRNA1P02708 482 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 CYBBP04839 570 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 TROVE2P10155 538 aaKnown RBP eCLIP4.47□□□□□ -1.69
CD44-213ENST00000525209 LYL1P12980 280 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 HGFP14210 728 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 FSTP19883 344 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 CPN2P22792 545 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 TIA1P31483 386 aaKnown RBP eCLIP4.47□□□□□ -1.69
CD44-213ENST00000525209 NUP62P37198 522 aaPredicted RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 CDKN1AP38936 164 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 MAGEA1P43355 309 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 GSTM5P46439 218 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 STARP49675 285 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 SERPINH1P50454 418 aaKnown RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 ARSEP51690 589 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 CLCN4P51793 760 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 DGKEP52429 567 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 EFNA5P52803 228 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 MFAP3P55082 362 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 FOXL2P58012 376 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 RPS8P62241 208 aaKnown RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 NOP14P78316 857 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms