RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 ALS2CLQ60I27 953 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 PDPK2PQ6A1A2 396 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 LVRNQ6Q4G3 990 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 GLT6D1Q7Z4J2 308 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 C17orf82Q86X59 251 aaPredicted RBP11.86□□□□□ -0.51
CLN8-207ENST00000524258 SDR16C5Q8N3Y7 309 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 FSTL5Q8N475 847 aaPredicted RBP11.86□□□□□ -0.51
CLN8-207ENST00000524258 PNPLA1Q8N8W4 532 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 ATL2Q8NHH9 583 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 ADAMTS14Q8WXS8 1223 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 APOLD1Q96LR9 279 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 VPS35Q96QK1 796 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 ZSCAN5AQ9BUG6 496 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 AP1M1Q9BXS5 423 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 SLC13A1Q9BZW2 595 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 CYP4F12Q9HCS2 524 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 CASS4Q9NQ75 786 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 RAD18Q9NS91 495 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 HOMER3Q9NSC5 361 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 TRNAU1APQ9NX07 287 aaKnown RBP11.86□□□□□ -0.51
CLN8-207ENST00000524258 VPS18Q9P253 973 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 PAK5Q9P286 719 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 FTSJ1Q9UET6 329 aa11.86□□□□□ -0.51
CLN8-207ENST00000524258 FEZ2Q9UHY8 353 aaPredicted RBP11.86□□□□□ -0.51
CLN8-207ENST00000524258 ACACBO00763 2458 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.85□□□□□ -0.51
CLN8-207ENST00000524258 NEMP2A6NFY4 417 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 MROH6A6NGR9 719 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 ERI2A8K979 691 aaKnown RBP11.85□□□□□ -0.51
CLN8-207ENST00000524258 PGRMC1O00264 195 aaKnown RBP11.85□□□□□ -0.51
CLN8-207ENST00000524258 CHUKO15111 745 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 GPR39O43194 453 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 UGT1A9O60656 530 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 PPFIA2O75334 1257 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 TPH1P17752 444 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 UGT1A6P19224 532 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 LPOP22079 712 aaPredicted RBP11.85□□□□□ -0.51
CLN8-207ENST00000524258 UGT1A1P22309 533 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 UGT1A4P22310 534 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 UGT1A3P35503 534 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 UGT1A5P35504 534 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 ADCY8P40145 1251 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 MAGEA6P43360 314 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 SHC2P98077 582 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 PEX6Q13608 980 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 CHRNA6Q15825 494 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 C6orf132Q5T0Z8 1188 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 ZNF534Q76KX8 674 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 RD3Q7Z3Z2 195 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 ADGRG6Q86SQ4 1221 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 SLC35F3Q8IY50 421 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 GPR156Q8NFN8 814 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 OR4K2Q8NGD2 314 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 OR52K1Q8NGK4 314 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 OR13C4Q8NGS5 318 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 GLYATL1Q969I3 302 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 MAGOHBQ96A72 148 aaKnown RBP11.85□□□□□ -0.51
CLN8-207ENST00000524258 DUSP23Q9BVJ7 150 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 SPATA16Q9BXB7 569 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 CARS2Q9HA77 564 aaKnown RBP11.85□□□□□ -0.51
CLN8-207ENST00000524258 UGT1A7Q9HAW7 530 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 UGT1A10Q9HAW8 530 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 UGT1A8Q9HAW9 530 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 ARFGAP3Q9NP61 516 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 RAB6BQ9NRW1 208 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 SPATS2LQ9NUQ6 558 aaKnown RBP11.85□□□□□ -0.51
CLN8-207ENST00000524258 PIH1D1Q9NWS0 290 aaKnown RBP11.85□□□□□ -0.51
CLN8-207ENST00000524258 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.85□□□□□ -0.51
CLN8-207ENST00000524258 ATXN10Q9UBB4 475 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 PCDHGA1Q9Y5H4 931 aa11.85□□□□□ -0.51
CLN8-207ENST00000524258 ARHGEF17Q96PE2 2063 aaPredicted RBP11.84□□□□□ -0.51
CLN8-207ENST00000524258 TCRBV7S3A2A0A539 114 aa11.84□□□□□ -0.51
CLN8-207ENST00000524258 GOLGA6CA6NDK9 693 aa11.84□□□□□ -0.51
CLN8-207ENST00000524258 GOLGA6BA6NDN3 693 aa11.84□□□□□ -0.51
CLN8-207ENST00000524258 NUAK1O60285 661 aa11.84□□□□□ -0.51
CLN8-207ENST00000524258 NOBOXO60393 691 aa11.84□□□□□ -0.51
CLN8-207ENST00000524258 SLC4A1P02730 911 aa11.84□□□□□ -0.51
CLN8-207ENST00000524258 GOLGA6DP0CG33 693 aa11.84□□□□□ -0.51
CLN8-207ENST00000524258 ZNF8P17098 575 aaPredicted RBP11.84□□□□□ -0.51
CLN8-207ENST00000524258 TCP1P17987 556 aaKnown RBP11.84□□□□□ -0.51
CLN8-207ENST00000524258 AK4P27144 223 aaPredicted RBP11.84□□□□□ -0.51
CLN8-207ENST00000524258 SPAM1P38567 509 aa11.84□□□□□ -0.51
CLN8-207ENST00000524258 FOXK2Q01167 660 aa11.84□□□□□ -0.51
CLN8-207ENST00000524258 CTBSQ01459 385 aa11.84□□□□□ -0.51
CLN8-207ENST00000524258 ELOCQ15369 112 aa11.84□□□□□ -0.51
CLN8-207ENST00000524258 TCEA2Q15560 299 aa11.84□□□□□ -0.51
CLN8-207ENST00000524258 CERCAMQ5T4B2 595 aa11.84□□□□□ -0.51
CLN8-207ENST00000524258 ZCCHC8Q6NZY4 707 aaKnown RBP11.84□□□□□ -0.51
CLN8-207ENST00000524258 DOK6Q6PKX4 331 aa11.84□□□□□ -0.51
CLN8-207ENST00000524258 C11orf96Q7Z7L8 435 aa11.84□□□□□ -0.51
CLN8-207ENST00000524258 ZNF547Q8IVP9 402 aa11.84□□□□□ -0.51
CLN8-207ENST00000524258 CHCHD4Q8N4Q1 142 aa11.84□□□□□ -0.51
CLN8-207ENST00000524258 NAPGQ99747 312 aaPredicted RBP11.84□□□□□ -0.51
CLN8-207ENST00000524258 TRIM39Q9HCM9 518 aa11.84□□□□□ -0.51
CLN8-207ENST00000524258 EIF2B3Q9NR50 452 aaKnown RBP11.84□□□□□ -0.51
CLN8-207ENST00000524258 SMOXQ9NWM0 555 aa11.84□□□□□ -0.51
CLN8-207ENST00000524258 GOLGA6AQ9NYA3 693 aa11.84□□□□□ -0.51
CLN8-207ENST00000524258 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.84□□□□□ -0.51
CLN8-207ENST00000524258 FKBPLQ9UIM3 349 aa11.84□□□□□ -0.51
CLN8-207ENST00000524258 TRBV5-4A0A0C4DH59 114 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms