RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 CCNE2O96020 404 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 SERPINA5P05154 406 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 DLDP09622 509 aaKnown RBP7.51□□□□□ -1.21
HDAC3-216ENST00000523088 MLNP12872 115 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 SRCP12931 536 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 KLRC1P26715 233 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 OXTRP30559 389 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 VHLP40337 213 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 GRIA4P48058 902 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 CASP4P49662 377 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 AFF3P51826 1226 aaKnown RBP7.51□□□□□ -1.21
HDAC3-216ENST00000523088 RIDAP52758 137 aaKnown RBP7.51□□□□□ -1.21
HDAC3-216ENST00000523088 PLK1P53350 603 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 CRYBB1P53674 252 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-216ENST00000523088 MAPK12P53778 367 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 NUP107P57740 925 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 UBE2HP62256 183 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 CDK16Q00536 496 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 FLI1Q01543 452 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-216ENST00000523088 GPM6BQ13491 265 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 PUM1Q14671 1186 aaKnown RBP eCLIP7.51□□□□□ -1.21
HDAC3-216ENST00000523088 CCDC142Q17RM4 750 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 SWI5Q1ZZU3 235 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 C2CD6Q53TS8 623 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 ZNF805Q5CZA5 627 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 TNFAIP8L3Q5GJ75 292 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 SCYL2Q6P3W7 929 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 C5orf46Q6UWT4 87 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 SPATC1Q76KD6 591 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 GPR155Q7Z3F1 870 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 TMCO2Q7Z6W1 182 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-216ENST00000523088 ZBTB33Q86T24 672 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 C12orf40Q86WS4 652 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 ERI1Q8IV48 349 aaKnown RBP7.51□□□□□ -1.21
HDAC3-216ENST00000523088 TMEM192Q8IY95 271 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 BLIDQ8IZY5 108 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 OXR1Q8N573 874 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 UBL4BQ8N7F7 174 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 ZNF781Q8N8C0 355 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 KDF1Q8NAX2 398 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-216ENST00000523088 PSD4Q8NDX1 1056 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 GPR156Q8NFN8 814 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 OR4D10Q8NGI6 311 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 PIGOQ8TEQ8 1089 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 CPT1BQ92523 772 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 NKD2Q969F2 451 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-216ENST00000523088 MARC2Q969Z3 335 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 ZNF689Q96CS4 500 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-216ENST00000523088 ELMO2Q96JJ3 720 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 ZNF641Q96N77 438 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-216ENST00000523088 RBM4BQ9BQ04 359 aaKnown RBP7.51□□□□□ -1.21
HDAC3-216ENST00000523088 SLC25A23Q9BV35 468 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 RBM4Q9BWF3 364 aaKnown RBP7.51□□□□□ -1.21
HDAC3-216ENST00000523088 C1QTNF1Q9BXJ1 281 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 TMEM120AQ9BXJ8 343 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 TDRD1Q9BXT4 1180 aaKnown RBP7.51□□□□□ -1.21
HDAC3-216ENST00000523088 SLC19A3Q9BZV2 496 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 RACGAP1Q9H0H5 632 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 HDHD2Q9H0R4 259 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 ADAMTS10Q9H324 1103 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 PABPC3Q9H361 631 aaKnown RBP7.51□□□□□ -1.21
HDAC3-216ENST00000523088 NSUN3Q9H649 340 aaKnown RBP7.51□□□□□ -1.21
HDAC3-216ENST00000523088 RSAD1Q9HA92 442 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 EPB41L5Q9HCM4 733 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 MLXIPLQ9NP71 852 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 PRDM6Q9NQX0 595 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 ASH2LQ9UBL3 628 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 CPNE7Q9UBL6 633 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 AGO1Q9UL18 857 aaKnown RBP7.51□□□□□ -1.21
HDAC3-216ENST00000523088 LRFN2Q9ULH4 789 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 PADI3Q9ULW8 664 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 USP18Q9UMW8 372 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 PCDHB10Q9UN67 800 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 NAALADL1Q9UQQ1 740 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 VPS9D1Q9Y2B5 631 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 PCDHB9Q9Y5E1 797 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 NPFFR2Q9Y5X5 522 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 XIRP2A4UGR9 3374 aa7.51□□□□□ -1.21
HDAC3-216ENST00000523088 SERTM2A0A1B0GWG4 89 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 DENND3A2RUS2 1198 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 GMNCA6NCL1 334 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 EPOPA6NHQ4 379 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 A6NLC8 198 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 PRR23D1E9PI22 279 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 KPNA4O00629 521 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 ARHGAP6O43182 974 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 IRAK2O43187 625 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 AKR7A2O43488 359 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 CHMP2AO43633 222 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 AP1G1O43747 822 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 GAS2O43903 313 aaKnown RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 DOK2O60496 412 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 GMDSO60547 372 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 MAGEC1O60732 1142 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 PHACTR2O75167 634 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 GABBR2O75899 941 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 CCNB2O95067 398 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 HTR3BO95264 441 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 C22orf31O95567 290 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 MMP1P03956 469 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms