RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 COX14Q96I36 57 aa15.3■□□□□ 0.04
MRPS28-209ENST00000522987 WDR24Q96S15 920 aa15.3■□□□□ 0.04
MRPS28-209ENST00000522987 CEP41Q9BYV8 373 aa15.3■□□□□ 0.04
MRPS28-209ENST00000522987 BRD8Q9H0E9 1235 aa15.3■□□□□ 0.04
MRPS28-209ENST00000522987 PCDH9Q9HC56 1237 aa15.3■□□□□ 0.04
MRPS28-209ENST00000522987 APMAPQ9HDC9 416 aa15.3■□□□□ 0.04
MRPS28-209ENST00000522987 IL17BQ9UHF5 180 aa15.3■□□□□ 0.04
MRPS28-209ENST00000522987 HECTD1Q9ULT8 2610 aa15.29■□□□□ 0.04
MRPS28-209ENST00000522987 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.29■□□□□ 0.04
MRPS28-209ENST00000522987 MYO1FO00160 1098 aa15.29■□□□□ 0.04
MRPS28-209ENST00000522987 KCNK1O00180 336 aa15.29■□□□□ 0.04
MRPS28-209ENST00000522987 MATN3O15232 486 aa15.29■□□□□ 0.04
MRPS28-209ENST00000522987 ARHGAP6O43182 974 aa15.29■□□□□ 0.04
MRPS28-209ENST00000522987 DNAJC6O75061 913 aa15.29■□□□□ 0.04
MRPS28-209ENST00000522987 SERPING1P05155 500 aa15.29■□□□□ 0.04
MRPS28-209ENST00000522987 ZNF30P17039 623 aa15.29■□□□□ 0.04
MRPS28-209ENST00000522987 CD86P42081 329 aa15.29■□□□□ 0.04
MRPS28-209ENST00000522987 FANCCQ00597 558 aa15.29■□□□□ 0.04
MRPS28-209ENST00000522987 SLC10A2Q12908 348 aaPredicted RBP15.29■□□□□ 0.04
MRPS28-209ENST00000522987 TRA2AQ13595 282 aaKnown RBP eCLIP15.29■□□□□ 0.04
MRPS28-209ENST00000522987 GALNT3Q14435 633 aa15.29■□□□□ 0.04
MRPS28-209ENST00000522987 PAFAH1B3Q15102 231 aaKnown RBP15.29■□□□□ 0.04
MRPS28-209ENST00000522987 HADHQ16836 314 aaKnown RBP15.29■□□□□ 0.04
MRPS28-209ENST00000522987 TMEM71Q6P5X7 295 aa15.29■□□□□ 0.04
MRPS28-209ENST00000522987 ATG14Q6ZNE5 492 aa15.29■□□□□ 0.04
MRPS28-209ENST00000522987 ZNF765Q7L2R6 523 aa15.29■□□□□ 0.04
MRPS28-209ENST00000522987 LUZP1Q86V48 1076 aa15.29■□□□□ 0.04
MRPS28-209ENST00000522987 SFRP1Q8N474 314 aa15.29■□□□□ 0.04
MRPS28-209ENST00000522987 CCNYQ8ND76 341 aa15.29■□□□□ 0.04
MRPS28-209ENST00000522987 CCDC112Q8NEF3 446 aa15.29■□□□□ 0.04
MRPS28-209ENST00000522987 ZNF564Q8TBZ8 553 aaPredicted RBP15.29■□□□□ 0.04
MRPS28-209ENST00000522987 MAML1Q92585 1016 aa15.29■□□□□ 0.04
MRPS28-209ENST00000522987 TBC1D10AQ9BXI6 508 aa15.29■□□□□ 0.04
MRPS28-209ENST00000522987 OSGEPL1Q9H4B0 414 aa15.29■□□□□ 0.04
MRPS28-209ENST00000522987 CTTNBP2NLQ9P2B4 639 aa15.29■□□□□ 0.04
MRPS28-209ENST00000522987 CNOT6Q9ULM6 557 aaKnown RBP15.29■□□□□ 0.04
MRPS28-209ENST00000522987 DOPEY2Q9Y3R5 2298 aa15.29■□□□□ 0.04
MRPS28-209ENST00000522987 TERTO14746 1132 aaKnown RBP15.28■□□□□ 0.04
MRPS28-209ENST00000522987 NKX2-8O15522 239 aa15.28■□□□□ 0.04
MRPS28-209ENST00000522987 PPFIA2O75334 1257 aa15.28■□□□□ 0.04
MRPS28-209ENST00000522987 JCHAINP01591 159 aa15.28■□□□□ 0.04
MRPS28-209ENST00000522987 FASLGP48023 281 aa15.28■□□□□ 0.04
MRPS28-209ENST00000522987 PEX6Q13608 980 aa15.28■□□□□ 0.04
MRPS28-209ENST00000522987 IFI16Q16666 785 aaKnown RBP15.28■□□□□ 0.04
MRPS28-209ENST00000522987 QPCTQ16769 361 aa15.28■□□□□ 0.04
MRPS28-209ENST00000522987 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.28■□□□□ 0.04
MRPS28-209ENST00000522987 DCAF12Q5T6F0 453 aa15.28■□□□□ 0.04
MRPS28-209ENST00000522987 TIGD7Q6NT04 549 aaPredicted RBP15.28■□□□□ 0.04
MRPS28-209ENST00000522987 ALKBH5Q6P6C2 394 aaKnown RBP15.28■□□□□ 0.04
MRPS28-209ENST00000522987 CRTC3Q6UUV7 619 aa15.28■□□□□ 0.04
MRPS28-209ENST00000522987 LYSMD3Q7Z3D4 306 aa15.28■□□□□ 0.04
MRPS28-209ENST00000522987 PACSIN1Q9BY11 444 aa15.28■□□□□ 0.04
MRPS28-209ENST00000522987 CBX8Q9HC52 389 aa15.28■□□□□ 0.04
MRPS28-209ENST00000522987 PRDM8Q9NQV8 689 aa15.28■□□□□ 0.04
MRPS28-209ENST00000522987 DTLQ9NZJ0 730 aa15.28■□□□□ 0.04
MRPS28-209ENST00000522987 PCDHGA3Q9Y5H0 932 aa15.28■□□□□ 0.04
MRPS28-209ENST00000522987 LOC101059948A0A1B0GTJ6 334 aa15.27■□□□□ 0.04
MRPS28-209ENST00000522987 SUV39H1O43463 412 aa15.27■□□□□ 0.04
MRPS28-209ENST00000522987 MMP2P08253 660 aa15.27■□□□□ 0.04
MRPS28-209ENST00000522987 CCNCP24863 283 aa15.27■□□□□ 0.04
MRPS28-209ENST00000522987 SPINT3P49223 89 aa15.27■□□□□ 0.04
MRPS28-209ENST00000522987 CSRP3P50461 194 aa15.27■□□□□ 0.04
MRPS28-209ENST00000522987 GPLD1P80108 840 aa15.27■□□□□ 0.04
MRPS28-209ENST00000522987 ZBTB17Q13105 803 aa15.27■□□□□ 0.04
MRPS28-209ENST00000522987 CLPPQ16740 277 aaPredicted RBP15.27■□□□□ 0.04
MRPS28-209ENST00000522987 SKIDA1Q1XH10 827 aa15.27■□□□□ 0.04
MRPS28-209ENST00000522987 ATP1A1-AS1Q5TC04 95 aa15.27■□□□□ 0.04
MRPS28-209ENST00000522987 BORAQ6PGQ7 559 aa15.27■□□□□ 0.04
MRPS28-209ENST00000522987 TIPARPQ7Z3E1 657 aaKnown RBP15.27■□□□□ 0.04
MRPS28-209ENST00000522987 PQLC3Q8N755 202 aa15.27■□□□□ 0.04
MRPS28-209ENST00000522987 BMPERQ8N8U9 685 aa15.27■□□□□ 0.04
MRPS28-209ENST00000522987 FAM71BQ8TC56 605 aa15.27■□□□□ 0.04
MRPS28-209ENST00000522987 RTP4Q96DX8 246 aa15.27■□□□□ 0.04
MRPS28-209ENST00000522987 DDA1Q9BW61 102 aa15.27■□□□□ 0.04
MRPS28-209ENST00000522987 SLC25A18Q9H1K4 315 aa15.27■□□□□ 0.04
MRPS28-209ENST00000522987 OR2AG1Q9H205 316 aa15.27■□□□□ 0.04
MRPS28-209ENST00000522987 FAM83DQ9H4H8 585 aa15.27■□□□□ 0.04
MRPS28-209ENST00000522987 RCOR3Q9P2K3 495 aaPredicted RBP15.27■□□□□ 0.04
MRPS28-209ENST00000522987 SHOC2Q9UQ13 582 aa15.27■□□□□ 0.04
MRPS28-209ENST00000522987 TNRC6AQ8NDV7 1962 aaKnown RBP15.27■□□□□ 0.03
MRPS28-209ENST00000522987 SYCE3A1L190 88 aa15.26■□□□□ 0.03
MRPS28-209ENST00000522987 MTX2O75431 263 aa15.26■□□□□ 0.03
MRPS28-209ENST00000522987 ZNF8P17098 575 aaPredicted RBP15.26■□□□□ 0.03
MRPS28-209ENST00000522987 TYRP1P17643 537 aa15.26■□□□□ 0.03
MRPS28-209ENST00000522987 PBX1P40424 430 aa15.26■□□□□ 0.03
MRPS28-209ENST00000522987 GFERP55789 205 aa15.26■□□□□ 0.03
MRPS28-209ENST00000522987 POLE2P56282 527 aa15.26■□□□□ 0.03
MRPS28-209ENST00000522987 UBASH3AP57075 661 aa15.26■□□□□ 0.03
MRPS28-209ENST00000522987 TLE1Q04724 770 aa15.26■□□□□ 0.03
MRPS28-209ENST00000522987 LRP8Q14114 963 aa15.26■□□□□ 0.03
MRPS28-209ENST00000522987 SEPT7Q16181 437 aaKnown RBP15.26■□□□□ 0.03
MRPS28-209ENST00000522987 PCSK7Q16549 785 aa15.26■□□□□ 0.03
MRPS28-209ENST00000522987 FIGNQ5HY92 759 aa15.26■□□□□ 0.03
MRPS28-209ENST00000522987 HENMT1Q5T8I9 393 aaKnown RBP15.26■□□□□ 0.03
MRPS28-209ENST00000522987 ALG1LQ6GMV1 187 aa15.26■□□□□ 0.03
MRPS28-209ENST00000522987 C16orf46Q6P387 395 aa15.26■□□□□ 0.03
MRPS28-209ENST00000522987 IYDQ6PHW0 289 aa15.26■□□□□ 0.03
MRPS28-209ENST00000522987 LRRC49Q8IUZ0 686 aa15.26■□□□□ 0.03
MRPS28-209ENST00000522987 CCDC13Q8IYE1 715 aa15.26■□□□□ 0.03
MRPS28-209ENST00000522987 RAPGEF5Q92565 580 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms