RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 MT-CO3P00414 261 aa16.26■□□□□ 0.19
PABPC1-221ENST00000522720 CAPNS1P04632 268 aa16.26■□□□□ 0.19
PABPC1-221ENST00000522720 ADRA1AP35348 466 aa16.26■□□□□ 0.19
PABPC1-221ENST00000522720 ILF3Q12906 894 aaKnown RBP eCLIP16.26■□□□□ 0.19
PABPC1-221ENST00000522720 TARDBPQ13148 414 aaKnown RBP eCLIP16.26■□□□□ 0.19
PABPC1-221ENST00000522720 PYCR3Q53H96 274 aa16.26■□□□□ 0.19
PABPC1-221ENST00000522720 CDCP2Q5VXM1 449 aa16.26■□□□□ 0.19
PABPC1-221ENST00000522720 ALS2CLQ60I27 953 aa16.26■□□□□ 0.19
PABPC1-221ENST00000522720 PDPK2PQ6A1A2 396 aa16.26■□□□□ 0.19
PABPC1-221ENST00000522720 KLHDC8BQ8IXV7 354 aa16.26■□□□□ 0.19
PABPC1-221ENST00000522720 TRAM1L1Q8N609 369 aa16.26■□□□□ 0.19
PABPC1-221ENST00000522720 TRIM58Q8NG06 486 aa16.26■□□□□ 0.19
PABPC1-221ENST00000522720 MAPK15Q8TD08 544 aa16.26■□□□□ 0.19
PABPC1-221ENST00000522720 FICDQ9BVA6 458 aa16.26■□□□□ 0.19
PABPC1-221ENST00000522720 GSDMCQ9BYG8 508 aa16.26■□□□□ 0.19
PABPC1-221ENST00000522720 FRMD8P1Q9BZ68 369 aaPredicted RBP16.26■□□□□ 0.19
PABPC1-221ENST00000522720 DPEP2Q9H4A9 486 aa16.26■□□□□ 0.19
PABPC1-221ENST00000522720 CLCA2Q9UQC9 943 aa16.26■□□□□ 0.19
PABPC1-221ENST00000522720 OAS3Q9Y6K5 1087 aaKnown RBP16.26■□□□□ 0.19
PABPC1-221ENST00000522720 TRABD2BA6NFA1 517 aa16.25■□□□□ 0.19
PABPC1-221ENST00000522720 NOBOXO60393 691 aa16.25■□□□□ 0.19
PABPC1-221ENST00000522720 ATP1A1P05023 1023 aaKnown RBP16.25■□□□□ 0.19
PABPC1-221ENST00000522720 STIP1P31948 543 aaKnown RBP16.25■□□□□ 0.19
PABPC1-221ENST00000522720 CTBSQ01459 385 aa16.25■□□□□ 0.19
PABPC1-221ENST00000522720 PARP6Q2NL67 630 aa16.25■□□□□ 0.19
PABPC1-221ENST00000522720 PERM1Q5SV97 790 aa16.25■□□□□ 0.19
PABPC1-221ENST00000522720 ZDHHC20Q5W0Z9 365 aa16.25■□□□□ 0.19
PABPC1-221ENST00000522720 ARHGEF18Q6ZSZ5 1173 aa16.25■□□□□ 0.19
PABPC1-221ENST00000522720 MARK2Q7KZI7 788 aaKnown RBP16.25■□□□□ 0.19
PABPC1-221ENST00000522720 PDCD7Q8N8D1 485 aaKnown RBP16.25■□□□□ 0.19
PABPC1-221ENST00000522720 OR6C4Q8NGE1 309 aa16.25■□□□□ 0.19
PABPC1-221ENST00000522720 BLOC1S5Q8TDH9 187 aa16.25■□□□□ 0.19
PABPC1-221ENST00000522720 PLEKHG4BQ96PX9 1271 aa16.25■□□□□ 0.19
PABPC1-221ENST00000522720 OR2M4Q96R27 311 aa16.25■□□□□ 0.19
PABPC1-221ENST00000522720 TMEM121Q9BTD3 319 aa16.25■□□□□ 0.19
PABPC1-221ENST00000522720 RMI1Q9H9A7 625 aa16.25■□□□□ 0.19
PABPC1-221ENST00000522720 BPIFA1Q9NP55 256 aa16.25■□□□□ 0.19
PABPC1-221ENST00000522720 SPATS2LQ9NUQ6 558 aaKnown RBP16.25■□□□□ 0.19
PABPC1-221ENST00000522720 IL17CQ9P0M4 197 aa16.25■□□□□ 0.19
PABPC1-221ENST00000522720 GPSM3Q9Y4H4 160 aa16.25■□□□□ 0.19
PABPC1-221ENST00000522720 ST14Q9Y5Y6 855 aa16.25■□□□□ 0.19
PABPC1-221ENST00000522720 APC2O95996 2303 aa16.25■□□□□ 0.19
PABPC1-221ENST00000522720 CACNA1BQ00975 2339 aa16.25■□□□□ 0.19
PABPC1-221ENST00000522720 LIASO43766 372 aa16.24■□□□□ 0.19
PABPC1-221ENST00000522720 DNAJC6O75061 913 aa16.24■□□□□ 0.19
PABPC1-221ENST00000522720 SLC25A14O95258 325 aaPredicted RBP16.24■□□□□ 0.19
PABPC1-221ENST00000522720 AK4P27144 223 aaPredicted RBP16.24■□□□□ 0.19
PABPC1-221ENST00000522720 GDF10P55107 478 aa16.24■□□□□ 0.19
PABPC1-221ENST00000522720 PEX6Q13608 980 aa16.24■□□□□ 0.19
PABPC1-221ENST00000522720 LRP8Q14114 963 aa16.24■□□□□ 0.19
PABPC1-221ENST00000522720 C14orf28Q4W4Y0 310 aa16.24■□□□□ 0.19
PABPC1-221ENST00000522720 ZNF569Q5MCW4 686 aa16.24■□□□□ 0.19
PABPC1-221ENST00000522720 GLT6D1Q7Z4J2 308 aa16.24■□□□□ 0.19
PABPC1-221ENST00000522720 C17orf82Q86X59 251 aaPredicted RBP16.24■□□□□ 0.19
PABPC1-221ENST00000522720 GALNT13Q8IUC8 556 aa16.24■□□□□ 0.19
PABPC1-221ENST00000522720 SFTPA2Q8IWL1 248 aa16.24■□□□□ 0.19
PABPC1-221ENST00000522720 DTX3LQ8TDB6 740 aa16.24■□□□□ 0.19
PABPC1-221ENST00000522720 ATG4AQ8WYN0 398 aa16.24■□□□□ 0.19
PABPC1-221ENST00000522720 GLYATL1Q969I3 302 aa16.24■□□□□ 0.19
PABPC1-221ENST00000522720 RTP4Q96DX8 246 aa16.24■□□□□ 0.19
PABPC1-221ENST00000522720 PDLIM2Q96JY6 352 aa16.24■□□□□ 0.19
PABPC1-221ENST00000522720 APOL2Q9BQE5 337 aa16.24■□□□□ 0.19
PABPC1-221ENST00000522720 TLR10Q9BXR5 811 aa16.24■□□□□ 0.19
PABPC1-221ENST00000522720 ARNT2Q9HBZ2 717 aa16.24■□□□□ 0.19
PABPC1-221ENST00000522720 TRIM39Q9HCM9 518 aa16.24■□□□□ 0.19
PABPC1-221ENST00000522720 IL26Q9NPH9 171 aa16.24■□□□□ 0.19
PABPC1-221ENST00000522720 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.24■□□□□ 0.19
PABPC1-221ENST00000522720 TAAR2Q9P1P5 351 aa16.24■□□□□ 0.19
PABPC1-221ENST00000522720 ZNHIT2Q9UHR6 403 aa16.24■□□□□ 0.19
PABPC1-221ENST00000522720 PLEKHM1Q9Y4G2 1056 aa16.24■□□□□ 0.19
PABPC1-221ENST00000522720 ANKRD11Q6UB99 2663 aaPredicted RBP16.24■□□□□ 0.19
PABPC1-221ENST00000522720 B4DGG1 531 aa16.23■□□□□ 0.19
PABPC1-221ENST00000522720 PPFIA2O75334 1257 aa16.23■□□□□ 0.19
PABPC1-221ENST00000522720 METTL18O95568 372 aa16.23■□□□□ 0.19
PABPC1-221ENST00000522720 GLB1P16278 677 aa16.23■□□□□ 0.19
PABPC1-221ENST00000522720 OLIG2Q13516 323 aa16.23■□□□□ 0.19
PABPC1-221ENST00000522720 HLTFQ14527 1009 aaKnown RBP eCLIP16.23■□□□□ 0.19
PABPC1-221ENST00000522720 OASLQ15646 514 aaKnown RBP16.23■□□□□ 0.19
PABPC1-221ENST00000522720 ST3GAL2Q16842 350 aa16.23■□□□□ 0.19
PABPC1-221ENST00000522720 CERCAMQ5T4B2 595 aa16.23■□□□□ 0.19
PABPC1-221ENST00000522720 KCTD11Q693B1 232 aa16.23■□□□□ 0.19
PABPC1-221ENST00000522720 DENND5AQ6IQ26 1287 aa16.23■□□□□ 0.19
PABPC1-221ENST00000522720 SLC30A9Q6PML9 568 aa16.23■□□□□ 0.19
PABPC1-221ENST00000522720 WDR48Q8TAF3 677 aa16.23■□□□□ 0.19
PABPC1-221ENST00000522720 ZDHHC1Q8WTX9 485 aa16.23■□□□□ 0.19
PABPC1-221ENST00000522720 C1orf54Q8WWF1 131 aa16.23■□□□□ 0.19
PABPC1-221ENST00000522720 LRRC45Q96CN5 670 aa16.23■□□□□ 0.19
PABPC1-221ENST00000522720 VPS35Q96QK1 796 aa16.23■□□□□ 0.19
PABPC1-221ENST00000522720 CCDC3Q9BQI4 270 aa16.23■□□□□ 0.19
PABPC1-221ENST00000522720 ATXN10Q9UBB4 475 aa16.23■□□□□ 0.19
PABPC1-221ENST00000522720 PKP3Q9Y446 797 aa16.23■□□□□ 0.19
PABPC1-221ENST00000522720 PCYT1BQ9Y5K3 369 aaPredicted RBP16.23■□□□□ 0.19
PABPC1-221ENST00000522720 DMXL2Q8TDJ6 3036 aa16.22■□□□□ 0.19
PABPC1-221ENST00000522720 BUD23O43709 281 aaKnown RBP16.22■□□□□ 0.19
PABPC1-221ENST00000522720 NUAK1O60285 661 aa16.22■□□□□ 0.19
PABPC1-221ENST00000522720 PNLIPP16233 465 aa16.22■□□□□ 0.19
PABPC1-221ENST00000522720 ZNF8P17098 575 aaPredicted RBP16.22■□□□□ 0.19
PABPC1-221ENST00000522720 LPOP22079 712 aaPredicted RBP16.22■□□□□ 0.19
PABPC1-221ENST00000522720 ACTR1BP42025 376 aa16.22■□□□□ 0.19
PABPC1-221ENST00000522720 ACTR1AP61163 376 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms