RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 CCNI2Q6ZMN8 369 aaPredicted RBP17.72■□□□□ 0.43
CLK4-211ENST00000522556 ARHGEF18Q6ZSZ5 1173 aa17.72■□□□□ 0.43
CLK4-211ENST00000522556 GLT6D1Q7Z4J2 308 aa17.72■□□□□ 0.43
CLK4-211ENST00000522556 GKN2Q86XP6 184 aa17.72■□□□□ 0.43
CLK4-211ENST00000522556 FAM46DQ8NEK8 389 aa17.72■□□□□ 0.43
CLK4-211ENST00000522556 PATE1Q8WXA2 126 aa17.72■□□□□ 0.43
CLK4-211ENST00000522556 SCARF2Q96GP6 870 aaPredicted RBP17.72■□□□□ 0.43
CLK4-211ENST00000522556 SMARCAL1Q9NZC9 954 aa17.72■□□□□ 0.43
CLK4-211ENST00000522556 IL17CQ9P0M4 197 aa17.72■□□□□ 0.43
CLK4-211ENST00000522556 NFKBIL1Q9UBC1 381 aaPredicted RBP17.72■□□□□ 0.43
CLK4-211ENST00000522556 MAP1BP46821 2468 aaKnown RBP17.71■□□□□ 0.43
CLK4-211ENST00000522556 EME2A4GXA9 379 aaPredicted RBP17.71■□□□□ 0.43
CLK4-211ENST00000522556 HMGCLP35914 325 aa17.71■□□□□ 0.43
CLK4-211ENST00000522556 CTBSQ01459 385 aa17.71■□□□□ 0.43
CLK4-211ENST00000522556 PYCR3Q53H96 274 aa17.71■□□□□ 0.43
CLK4-211ENST00000522556 SLC30A9Q6PML9 568 aa17.71■□□□□ 0.43
CLK4-211ENST00000522556 RAVER1Q8IY67 606 aaKnown RBP17.71■□□□□ 0.43
CLK4-211ENST00000522556 SLC35F6Q8N357 371 aa17.71■□□□□ 0.43
CLK4-211ENST00000522556 GPBAR1Q8TDU6 330 aa17.71■□□□□ 0.43
CLK4-211ENST00000522556 RTP4Q96DX8 246 aa17.71■□□□□ 0.43
CLK4-211ENST00000522556 OR2M4Q96R27 311 aa17.71■□□□□ 0.43
CLK4-211ENST00000522556 TBL1YQ9BQ87 522 aa17.71■□□□□ 0.43
CLK4-211ENST00000522556 FERMT1Q9BQL6 677 aa17.71■□□□□ 0.43
CLK4-211ENST00000522556 IL26Q9NPH9 171 aa17.71■□□□□ 0.43
CLK4-211ENST00000522556 ATXN10Q9UBB4 475 aa17.71■□□□□ 0.43
CLK4-211ENST00000522556 GPSM3Q9Y4H4 160 aa17.71■□□□□ 0.43
CLK4-211ENST00000522556 BPTFQ12830 3046 aa17.71■□□□□ 0.43
CLK4-211ENST00000522556 TPRP12270 2363 aaKnown RBP17.71■□□□□ 0.42
CLK4-211ENST00000522556 ACACBO00763 2458 aa17.7■□□□□ 0.42
CLK4-211ENST00000522556 RGSL1A5PLK6 1076 aa17.7■□□□□ 0.42
CLK4-211ENST00000522556 CCL22O00626 93 aa17.7■□□□□ 0.42
CLK4-211ENST00000522556 CEP104O60308 925 aa17.7■□□□□ 0.42
CLK4-211ENST00000522556 OPA1O60313 960 aa17.7■□□□□ 0.42
CLK4-211ENST00000522556 EML2O95834 649 aa17.7■□□□□ 0.42
CLK4-211ENST00000522556 FGGP02679 453 aa17.7■□□□□ 0.42
CLK4-211ENST00000522556 ZSCAN5DPP0CG00 497 aa17.7■□□□□ 0.42
CLK4-211ENST00000522556 MAZP56270 477 aaKnown RBP17.7■□□□□ 0.42
CLK4-211ENST00000522556 CAMK2BQ13554 666 aa17.7■□□□□ 0.42
CLK4-211ENST00000522556 PRPSAP1Q14558 356 aa17.7■□□□□ 0.42
CLK4-211ENST00000522556 CHRNA6Q15825 494 aa17.7■□□□□ 0.42
CLK4-211ENST00000522556 ATP13A5Q4VNC0 1218 aa17.7■□□□□ 0.42
CLK4-211ENST00000522556 ZNF569Q5MCW4 686 aa17.7■□□□□ 0.42
CLK4-211ENST00000522556 FAM151BQ6UXP7 276 aa17.7■□□□□ 0.42
CLK4-211ENST00000522556 TRAM1L1Q8N609 369 aa17.7■□□□□ 0.42
CLK4-211ENST00000522556 PDCD7Q8N8D1 485 aaKnown RBP17.7■□□□□ 0.42
CLK4-211ENST00000522556 ARL10Q8N8L6 244 aa17.7■□□□□ 0.42
CLK4-211ENST00000522556 GPR156Q8NFN8 814 aa17.7■□□□□ 0.42
CLK4-211ENST00000522556 NAT14Q8WUY8 206 aa17.7■□□□□ 0.42
CLK4-211ENST00000522556 CCDC74AQ96AQ1 378 aa17.7■□□□□ 0.42
CLK4-211ENST00000522556 MS4A14Q96JA4 679 aa17.7■□□□□ 0.42
CLK4-211ENST00000522556 TAAR2Q9P1P5 351 aa17.7■□□□□ 0.42
CLK4-211ENST00000522556 PYCARDQ9ULZ3 195 aa17.7■□□□□ 0.42
CLK4-211ENST00000522556 PADI4Q9UM07 663 aa17.7■□□□□ 0.42
CLK4-211ENST00000522556 UGT1A9O60656 530 aa17.69■□□□□ 0.42
CLK4-211ENST00000522556 IFNB1P01574 187 aa17.69■□□□□ 0.42
CLK4-211ENST00000522556 ZNF8P17098 575 aaPredicted RBP17.69■□□□□ 0.42
CLK4-211ENST00000522556 TPH1P17752 444 aa17.69■□□□□ 0.42
CLK4-211ENST00000522556 UGT1A6P19224 532 aa17.69■□□□□ 0.42
CLK4-211ENST00000522556 UGT1A1P22309 533 aa17.69■□□□□ 0.42
CLK4-211ENST00000522556 UGT1A4P22310 534 aa17.69■□□□□ 0.42
CLK4-211ENST00000522556 UGT1A3P35503 534 aa17.69■□□□□ 0.42
CLK4-211ENST00000522556 UGT1A5P35504 534 aa17.69■□□□□ 0.42
CLK4-211ENST00000522556 KCNJ1P48048 391 aa17.69■□□□□ 0.42
CLK4-211ENST00000522556 TARDBPQ13148 414 aaKnown RBP eCLIP17.69■□□□□ 0.42
CLK4-211ENST00000522556 ILKQ13418 452 aa17.69■□□□□ 0.42
CLK4-211ENST00000522556 PARP6Q2NL67 630 aa17.69■□□□□ 0.42
CLK4-211ENST00000522556 LVRNQ6Q4G3 990 aa17.69■□□□□ 0.42
CLK4-211ENST00000522556 CRTC3Q6UUV7 619 aa17.69■□□□□ 0.42
CLK4-211ENST00000522556 ADGRG6Q86SQ4 1221 aa17.69■□□□□ 0.42
CLK4-211ENST00000522556 OR13C4Q8NGS5 318 aa17.69■□□□□ 0.42
CLK4-211ENST00000522556 GLYATL1Q969I3 302 aa17.69■□□□□ 0.42
CLK4-211ENST00000522556 CCDC97Q96F63 343 aaPredicted RBP17.69■□□□□ 0.42
CLK4-211ENST00000522556 ZSCAN5AQ9BUG6 496 aa17.69■□□□□ 0.42
CLK4-211ENST00000522556 OR2AG1Q9H205 316 aa17.69■□□□□ 0.42
CLK4-211ENST00000522556 DPEP2Q9H4A9 486 aa17.69■□□□□ 0.42
CLK4-211ENST00000522556 UGT1A7Q9HAW7 530 aa17.69■□□□□ 0.42
CLK4-211ENST00000522556 UGT1A10Q9HAW8 530 aa17.69■□□□□ 0.42
CLK4-211ENST00000522556 UGT1A8Q9HAW9 530 aa17.69■□□□□ 0.42
CLK4-211ENST00000522556 TRNAU1APQ9NX07 287 aaKnown RBP17.69■□□□□ 0.42
CLK4-211ENST00000522556 ZNF148Q9UQR1 794 aa17.69■□□□□ 0.42
CLK4-211ENST00000522556 AAR2Q9Y312 384 aaKnown RBP17.69■□□□□ 0.42
CLK4-211ENST00000522556 SLC25A14O95258 325 aaPredicted RBP17.68■□□□□ 0.42
CLK4-211ENST00000522556 PYGLP06737 847 aa17.68■□□□□ 0.42
CLK4-211ENST00000522556 IGF2RP11717 2491 aa17.68■□□□□ 0.42
CLK4-211ENST00000522556 SPAM1P38567 509 aa17.68■□□□□ 0.42
CLK4-211ENST00000522556 ACTR1BP42025 376 aa17.68■□□□□ 0.42
CLK4-211ENST00000522556 GRIA1P42261 906 aa17.68■□□□□ 0.42
CLK4-211ENST00000522556 TNNT3P45378 269 aaPredicted RBP17.68■□□□□ 0.42
CLK4-211ENST00000522556 DUSP3P51452 185 aaPredicted RBP17.68■□□□□ 0.42
CLK4-211ENST00000522556 ACTR1AP61163 376 aa17.68■□□□□ 0.42
CLK4-211ENST00000522556 ILF3Q12906 894 aaKnown RBP eCLIP17.68■□□□□ 0.42
CLK4-211ENST00000522556 PLA2G4EQ3MJ16 856 aa17.68■□□□□ 0.42
CLK4-211ENST00000522556 GALNT13Q8IUC8 556 aa17.68■□□□□ 0.42
CLK4-211ENST00000522556 GALNT15Q8N3T1 639 aa17.68■□□□□ 0.42
CLK4-211ENST00000522556 OR4K2Q8NGD2 314 aa17.68■□□□□ 0.42
CLK4-211ENST00000522556 MAPK15Q8TD08 544 aa17.68■□□□□ 0.42
CLK4-211ENST00000522556 PLEKHG4BQ96PX9 1271 aa17.68■□□□□ 0.42
CLK4-211ENST00000522556 CCDC3Q9BQI4 270 aa17.68■□□□□ 0.42
CLK4-211ENST00000522556 GSDMCQ9BYG8 508 aa17.68■□□□□ 0.42
CLK4-211ENST00000522556 TRABDQ9H4I3 376 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms