RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 PLA2G2AP14555 144 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 GABRB1P18505 474 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 ACADLP28330 430 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 HOXD13P35453 343 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 HADHAP40939 763 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 BRWD1-AS2P59051 145 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 SNTA1Q13424 505 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 SF3B4Q15427 424 aaKnown RBP eCLIP3.65□□□□□ -1.83
VPS13B-207ENST00000518569 MEA1Q16626 185 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 ASTE1Q2TB18 679 aaPredicted RBP3.65□□□□□ -1.83
VPS13B-207ENST00000518569 ZNF585BQ52M93 769 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 ZNF805Q5CZA5 627 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 KCNT1Q5JUK3 1230 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 PLEKHS1Q5SXH7 462 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 LRIF1Q5T3J3 769 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 C9orf57Q5W0N0 161 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 LCN10Q6JVE6 187 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 TRNP1Q6NT89 227 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 RGMBQ6NW40 437 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 CFAP77Q6ZQR2 320 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 FASTKD5Q7L8L6 764 aaKnown RBP3.65□□□□□ -1.83
VPS13B-207ENST00000518569 PCGF5Q86SE9 256 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 NRROSQ86YC3 692 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 EPHX4Q8IUS5 362 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 TMTC2Q8N394 836 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 C1orf131Q8NDD1 294 aaKnown RBP3.65□□□□□ -1.83
VPS13B-207ENST00000518569 SPATA22Q8NHS9 363 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 ZKSCAN4Q969J2 545 aaPredicted RBP3.65□□□□□ -1.83
VPS13B-207ENST00000518569 GRAMD2BQ96HH9 432 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 FAM84BQ96KN1 310 aaPredicted RBP3.65□□□□□ -1.83
VPS13B-207ENST00000518569 BARD1Q99728 777 aaKnown RBP3.65□□□□□ -1.83
VPS13B-207ENST00000518569 TMEM39BQ9GZU3 492 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 SMARCAD1Q9H4L7 1026 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 TMEM30AQ9NV96 361 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 MTMR10Q9NXD2 777 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 NSMCE4AQ9NXX6 385 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 COPG2Q9UBF2 871 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 CLSPNQ9HAW4 1339 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 CKAP5Q14008 2032 aa3.65□□□□□ -1.83
VPS13B-207ENST00000518569 CCDC180Q9P1Z9 1646 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 EME2A4GXA9 379 aaPredicted RBP3.64□□□□□ -1.83
VPS13B-207ENST00000518569 LILRA5A6NI73 299 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 AGAP14A8MT82 685 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 ATP2A1O14983 1001 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 SLC16A5O15375 505 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 GPC4O75487 556 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 TGFB3P10600 412 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 S1PR1P21453 382 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 UGT1A1P22309 533 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 MCM3P25205 808 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 APOBEC1P41238 236 aaKnown RBP3.64□□□□□ -1.83
VPS13B-207ENST00000518569 GARSP41250 739 aaKnown RBP3.64□□□□□ -1.83
VPS13B-207ENST00000518569 CAMPP49913 170 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 TAS2R38P59533 333 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 CREB5Q02930 508 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 SREBF2Q12772 1141 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 PRKG2Q13237 762 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 SLC39A14Q15043 492 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 MYLK3Q32MK0 819 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 DUSP28Q4G0W2 176 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 RARS2Q5T160 578 aaKnown RBP3.64□□□□□ -1.83
VPS13B-207ENST00000518569 CAPRIN2Q6IMN6 1127 aaKnown RBP3.64□□□□□ -1.83
VPS13B-207ENST00000518569 ZNF280DQ6N043 979 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 KIAA1161Q6NSJ0 714 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 PRSS57Q6UWY2 283 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 ARMC9Q7Z3E5 817 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 SRBD1Q8N5C6 995 aaKnown RBP3.64□□□□□ -1.83
VPS13B-207ENST00000518569 OR2AK2Q8NG84 335 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 OR1J2Q8NGS2 313 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 OR8K5Q8NH50 307 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 DNAAF4Q8WXU2 420 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 MOAP1Q96BY2 351 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 RHBDF1Q96CC6 855 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 FAM120BQ96EK7 910 aaKnown RBP3.64□□□□□ -1.83
VPS13B-207ENST00000518569 EGLN2Q96KS0 407 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 QRFPRQ96P65 431 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 MTERF1Q99551 399 aaKnown RBP3.64□□□□□ -1.83
VPS13B-207ENST00000518569 SDF4Q9BRK5 362 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 FTOQ9C0B1 505 aaKnown RBP eCLIP3.64□□□□□ -1.83
VPS13B-207ENST00000518569 PLK3Q9H4B4 646 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 EBF2Q9HAK2 575 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 SEBOXQ9HB31 216 aaPredicted RBP3.64□□□□□ -1.83
VPS13B-207ENST00000518569 EPB41L5Q9HCM4 733 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 SETD4Q9NVD3 440 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 HAUS2Q9NVX0 235 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 MAP3K20Q9NYL2 800 aaKnown RBP3.64□□□□□ -1.83
VPS13B-207ENST00000518569 OGFRQ9NZT2 677 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 STK39Q9UEW8 545 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 FBXL17Q9UF56 701 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 FBXO2Q9UK22 296 aaPredicted RBP3.64□□□□□ -1.83
VPS13B-207ENST00000518569 VDAC3Q9Y277 283 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 R3HDM2Q9Y2K5 976 aaKnown RBP3.64□□□□□ -1.83
VPS13B-207ENST00000518569 AMDHD2Q9Y303 409 aa3.64□□□□□ -1.83
VPS13B-207ENST00000518569 ZNF644Q9H582 1327 aaPredicted RBP3.64□□□□□ -1.83
VPS13B-207ENST00000518569 CACNA1IQ9P0X4 2223 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 EVPLQ92817 2033 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 RSF1Q96T23 1441 aaPredicted RBP3.63□□□□□ -1.83
VPS13B-207ENST00000518569 FAM90A26D6RGX4 464 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 MAP2K7O14733 419 aa3.63□□□□□ -1.83
VPS13B-207ENST00000518569 HS3ST1O14792 307 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms