RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 TMEM168Q9H0V1 697 aa21.82■■□□□ 1.08
VEGFA-217ENST00000518538 EIF2B3Q9NR50 452 aaKnown RBP21.82■■□□□ 1.08
VEGFA-217ENST00000518538 TOR4AQ9NXH8 423 aa21.82■■□□□ 1.08
VEGFA-217ENST00000518538 APOBEC2Q9Y235 224 aaKnown RBP21.82■■□□□ 1.08
VEGFA-217ENST00000518538 OAS3Q9Y6K5 1087 aaKnown RBP21.82■■□□□ 1.08
VEGFA-217ENST00000518538 FANCGO15287 622 aa21.81■■□□□ 1.08
VEGFA-217ENST00000518538 YY2O15391 372 aa21.81■■□□□ 1.08
VEGFA-217ENST00000518538 SLC25A14O95258 325 aaPredicted RBP21.81■■□□□ 1.08
VEGFA-217ENST00000518538 APRTP07741 180 aa21.81■■□□□ 1.08
VEGFA-217ENST00000518538 ADRB1P08588 477 aa21.81■■□□□ 1.08
VEGFA-217ENST00000518538 GNPDA1P46926 289 aa21.81■■□□□ 1.08
VEGFA-217ENST00000518538 FNTAP49354 379 aa21.81■■□□□ 1.08
VEGFA-217ENST00000518538 BASP1P80723 227 aaKnown RBP21.81■■□□□ 1.08
VEGFA-217ENST00000518538 CDH17Q12864 832 aa21.81■■□□□ 1.08
VEGFA-217ENST00000518538 CCDC137Q6PK04 289 aaKnown RBP21.81■■□□□ 1.08
VEGFA-217ENST00000518538 LVRNQ6Q4G3 990 aa21.81■■□□□ 1.08
VEGFA-217ENST00000518538 PPP1R21Q6ZMI0 780 aa21.81■■□□□ 1.08
VEGFA-217ENST00000518538 PHYKPLQ8IUZ5 450 aa21.81■■□□□ 1.08
VEGFA-217ENST00000518538 OR4K2Q8NGD2 314 aa21.81■■□□□ 1.08
VEGFA-217ENST00000518538 OR52K1Q8NGK4 314 aa21.81■■□□□ 1.08
VEGFA-217ENST00000518538 PTCD2Q8WV60 388 aaKnown RBP21.81■■□□□ 1.08
VEGFA-217ENST00000518538 VPS35Q96QK1 796 aa21.81■■□□□ 1.08
VEGFA-217ENST00000518538 DOLKQ9UPQ8 538 aa21.81■■□□□ 1.08
VEGFA-217ENST00000518538 KCTD3Q9Y597 815 aa21.81■■□□□ 1.08
VEGFA-217ENST00000518538 GLYATL1P3A0A0U1RQE8 302 aa21.8■■□□□ 1.08
VEGFA-217ENST00000518538 MED19A0JLT2 244 aaPredicted RBP21.8■■□□□ 1.08
VEGFA-217ENST00000518538 LDB2O43679 373 aa21.8■■□□□ 1.08
VEGFA-217ENST00000518538 ASMTLO95671 621 aa21.8■■□□□ 1.08
VEGFA-217ENST00000518538 CKMT2P17540 419 aa21.8■■□□□ 1.08
VEGFA-217ENST00000518538 TPH1P17752 444 aa21.8■■□□□ 1.08
VEGFA-217ENST00000518538 ZNF140P52738 457 aaPredicted RBP21.8■■□□□ 1.08
VEGFA-217ENST00000518538 PTPRCAPQ14761 206 aa21.8■■□□□ 1.08
VEGFA-217ENST00000518538 TCEA2Q15560 299 aa21.8■■□□□ 1.08
VEGFA-217ENST00000518538 ATP13A5Q4VNC0 1218 aa21.8■■□□□ 1.08
VEGFA-217ENST00000518538 C6orf132Q5T0Z8 1188 aa21.8■■□□□ 1.08
VEGFA-217ENST00000518538 FAM151BQ6UXP7 276 aa21.8■■□□□ 1.08
VEGFA-217ENST00000518538 CREG2Q8IUH2 290 aa21.8■■□□□ 1.08
VEGFA-217ENST00000518538 DNAAF3Q8N9W5 541 aa21.8■■□□□ 1.08
VEGFA-217ENST00000518538 SCG3Q8WXD2 468 aaKnown RBP21.8■■□□□ 1.08
VEGFA-217ENST00000518538 APOLD1Q96LR9 279 aa21.8■■□□□ 1.08
VEGFA-217ENST00000518538 SUDS3Q9H7L9 328 aaPredicted RBP21.8■■□□□ 1.08
VEGFA-217ENST00000518538 PIH1D1Q9NWS0 290 aaKnown RBP21.8■■□□□ 1.08
VEGFA-217ENST00000518538 TRNAU1APQ9NX07 287 aaKnown RBP21.8■■□□□ 1.08
VEGFA-217ENST00000518538 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.79■■□□□ 1.08
VEGFA-217ENST00000518538 GAPDHSO14556 408 aaPredicted RBP21.79■■□□□ 1.08
VEGFA-217ENST00000518538 DNAJC6O75061 913 aa21.79■■□□□ 1.08
VEGFA-217ENST00000518538 DKK1O94907 266 aa21.79■■□□□ 1.08
VEGFA-217ENST00000518538 GAS8O95995 478 aa21.79■■□□□ 1.08
VEGFA-217ENST00000518538 KRT14P02533 472 aa21.79■■□□□ 1.08
VEGFA-217ENST00000518538 ACADVLP49748 655 aa21.79■■□□□ 1.08
VEGFA-217ENST00000518538 DNAJC3Q13217 504 aa21.79■■□□□ 1.08
VEGFA-217ENST00000518538 ITGA9Q13797 1035 aa21.79■■□□□ 1.08
VEGFA-217ENST00000518538 TRIP13Q15645 432 aaPredicted RBP21.79■■□□□ 1.08
VEGFA-217ENST00000518538 CHRNA6Q15825 494 aa21.79■■□□□ 1.08
VEGFA-217ENST00000518538 PYCR3Q53H96 274 aa21.79■■□□□ 1.08
VEGFA-217ENST00000518538 SLCO6A1Q86UG4 719 aa21.79■■□□□ 1.08
VEGFA-217ENST00000518538 GPBAR1Q8TDU6 330 aa21.79■■□□□ 1.08
VEGFA-217ENST00000518538 GRK7Q8WTQ7 553 aa21.79■■□□□ 1.08
VEGFA-217ENST00000518538 CAPZA3Q96KX2 299 aa21.79■■□□□ 1.08
VEGFA-217ENST00000518538 OR2M4Q96R27 311 aa21.79■■□□□ 1.08
VEGFA-217ENST00000518538 BOCQ9BWV1 1114 aa21.79■■□□□ 1.08
VEGFA-217ENST00000518538 RMI1Q9H9A7 625 aa21.79■■□□□ 1.08
VEGFA-217ENST00000518538 TRIM39Q9HCM9 518 aa21.79■■□□□ 1.08
VEGFA-217ENST00000518538 CASS4Q9NQ75 786 aa21.79■■□□□ 1.08
VEGFA-217ENST00000518538 EVA1BQ9NVM1 165 aa21.79■■□□□ 1.08
VEGFA-217ENST00000518538 NCKIPSDQ9NZQ3 722 aa21.79■■□□□ 1.08
VEGFA-217ENST00000518538 APPL1Q9UKG1 709 aa21.79■■□□□ 1.08
VEGFA-217ENST00000518538 TMPRSS11EQ9UL52 423 aa21.79■■□□□ 1.08
VEGFA-217ENST00000518538 PCDHGA1Q9Y5H4 931 aa21.79■■□□□ 1.08
VEGFA-217ENST00000518538 CNOT1A5YKK6 2376 aaKnown RBP21.79■■□□□ 1.08
VEGFA-217ENST00000518538 GPR89AB7ZAQ6 455 aa21.78■■□□□ 1.08
VEGFA-217ENST00000518538 GPR89BP0CG08 455 aa21.78■■□□□ 1.08
VEGFA-217ENST00000518538 CKMT1AP12532 417 aa21.78■■□□□ 1.08
VEGFA-217ENST00000518538 ACP1P24666 158 aa21.78■■□□□ 1.08
VEGFA-217ENST00000518538 ADCY8P40145 1251 aa21.78■■□□□ 1.08
VEGFA-217ENST00000518538 HADHAP40939 763 aa21.78■■□□□ 1.08
VEGFA-217ENST00000518538 GRIA1P42261 906 aa21.78■■□□□ 1.08
VEGFA-217ENST00000518538 DAB2P98082 770 aa21.78■■□□□ 1.08
VEGFA-217ENST00000518538 ILF3Q12906 894 aaKnown RBP eCLIP21.78■■□□□ 1.08
VEGFA-217ENST00000518538 POU6F1Q14863 301 aa21.78■■□□□ 1.08
VEGFA-217ENST00000518538 MARK2Q7KZI7 788 aaKnown RBP21.78■■□□□ 1.08
VEGFA-217ENST00000518538 TAF8Q7Z7C8 310 aa21.78■■□□□ 1.08
VEGFA-217ENST00000518538 GALNT13Q8IUC8 556 aa21.78■■□□□ 1.08
VEGFA-217ENST00000518538 OR13C4Q8NGS5 318 aa21.78■■□□□ 1.08
VEGFA-217ENST00000518538 CCL4L1Q8NHW4 92 aa21.78■■□□□ 1.08
VEGFA-217ENST00000518538 GSDMCQ9BYG8 508 aa21.78■■□□□ 1.08
VEGFA-217ENST00000518538 SMOXQ9NWM0 555 aa21.78■■□□□ 1.08
VEGFA-217ENST00000518538 ATXN10Q9UBB4 475 aa21.78■■□□□ 1.08
VEGFA-217ENST00000518538 FKBPLQ9UIM3 349 aa21.78■■□□□ 1.08
VEGFA-217ENST00000518538 NEU2Q9Y3R4 380 aa21.78■■□□□ 1.08
VEGFA-217ENST00000518538 GPSM3Q9Y4H4 160 aa21.78■■□□□ 1.08
VEGFA-217ENST00000518538 ARID1BQ8NFD5 2236 aaPredicted RBP21.78■■□□□ 1.08
VEGFA-217ENST00000518538 LY6G6EA0A0G2JKS1 128 aa21.77■■□□□ 1.08
VEGFA-217ENST00000518538 NUAK1O60285 661 aa21.77■■□□□ 1.08
VEGFA-217ENST00000518538 TRIM16O95361 564 aa21.77■■□□□ 1.08
VEGFA-217ENST00000518538 PRAMEF1O95521 474 aa21.77■■□□□ 1.08
VEGFA-217ENST00000518538 DUSP3P51452 185 aaPredicted RBP21.77■■□□□ 1.08
VEGFA-217ENST00000518538 ETF1P62495 437 aaKnown RBP21.77■■□□□ 1.08
VEGFA-217ENST00000518538 CDK16Q00536 496 aa21.77■■□□□ 1.08
VEGFA-217ENST00000518538 GPS1Q13098 491 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms