RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 DUS2Q9NX74 493 aaKnown RBP12.22□□□□□ -0.45
PCDHGA6-201ENST00000517434 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.22□□□□□ -0.45
PCDHGA6-201ENST00000517434 SNX7Q9UNH6 387 aa12.22□□□□□ -0.45
PCDHGA6-201ENST00000517434 ASTN1O14525 1302 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 A0A087X1B8 175 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 TPP1O14773 563 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 MDM4O15151 490 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 NDUFB5O43674 189 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 LPOP22079 712 aaPredicted RBP12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 KLF10Q13118 480 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 IRF5Q13568 498 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 FNBP1LQ5T0N5 605 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 PIWIL4Q7Z3Z4 852 aaKnown RBP12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 CACUL1Q86Y37 369 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 ZFP28Q8NHY6 868 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 HM13Q8TCT9 377 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 PIK3R3Q92569 461 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 REXO2Q9Y3B8 237 aaKnown RBP12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 WASF2Q9Y6W5 498 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 H3BM21 787 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 AXIN1O15169 862 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 ALOX15BO15296 676 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 CCL16O15467 120 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 TOP3BO95985 862 aaKnown RBP12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 PENKP01210 267 aaPredicted RBP12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 CCNB1P14635 433 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 MGAT1P26572 445 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 AQP4P55087 323 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 SLC25A52Q3SY17 297 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 ZNF697Q5TEC3 545 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 ZNF614Q8N883 585 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 CLPTM1LQ96KA5 538 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 ZNF570Q96NI8 536 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 BBS4Q96RK4 519 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 TBCDQ9BTW9 1192 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 GSDMCQ9BYG8 508 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 POMKQ9H5K3 350 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 OPTCQ9UBM4 332 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 GPSM3Q9Y4H4 160 aa12.21□□□□□ -0.45
PCDHGA6-201ENST00000517434 NEDD8-MDP1E9PL57 170 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 SMIM22K7EJ46 135 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 TRAFD1O14545 582 aaPredicted RBP12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 CHADO15335 359 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 TNFSF9P41273 254 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 MTHFRP42898 656 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 GSTM5P46439 218 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 GABRB2P47870 512 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 BHLHB9Q6PI77 547 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 P2RY8Q86VZ1 359 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 GPR135Q8IZ08 494 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 OFCC1Q8IZS5 231 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 METTL6Q8TCB7 284 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 ELMO1Q92556 727 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 RERGQ96A58 199 aaPredicted RBP12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 ACDQ96AP0 544 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 ACOX2Q99424 681 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 MED28Q9H204 178 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 CRISPLD1Q9H336 500 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 CAPN10Q9HC96 672 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 RPS6KA6Q9UK32 745 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 GRIN2DO15399 1336 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 E7ENX8 843 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 GABBR2O75899 941 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 CST1P01037 141 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 S100A3P33764 101 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 SLC7A2P52569 658 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 FGD3Q5JSP0 725 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 NIPAL1Q6NVV3 410 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 SMYD1Q8NB12 490 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 GPN3Q9UHW5 284 aaPredicted RBP12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 NR2E1Q9Y466 385 aa12.21□□□□□ -0.46
PCDHGA6-201ENST00000517434 PEX11AO75192 247 aa12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 TIPRLO75663 272 aa12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 BLKP51451 505 aa12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 RPL26P61254 145 aaKnown RBP12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 VBP1P61758 197 aa12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 HERC3Q15034 1050 aa12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 ZNHIT3Q15649 155 aaPredicted RBP12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 ACSBG2Q5FVE4 666 aa12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 VARS2Q5ST30 1063 aaKnown RBP12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 SEMA3CQ99985 751 aa12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 RNF38Q9H0F5 515 aa12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 CCSER2Q9H7U1 834 aa12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 ARL15Q9NXU5 204 aa12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 SMPD3Q9NY59 655 aaPredicted RBP12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 TMEM216Q9P0N5 145 aa12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 NFKBIL1Q9UBC1 381 aaPredicted RBP12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 NCANO14594 1321 aa12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 PLK4O00444 970 aa12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 YES1P07947 543 aa12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 HNF4AP41235 474 aa12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 CLCN5P51795 746 aa12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 RGS1Q08116 209 aa12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 NADK2Q4G0N4 442 aa12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 METTL21CQ5VZV1 264 aa12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 TMEM53Q6P2H8 277 aa12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 MEIOBQ8N635 442 aa12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 OR5B17Q8NGF7 314 aa12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 ANKRD49Q8WVL7 239 aa12.2□□□□□ -0.46
PCDHGA6-201ENST00000517434 SNX27Q96L92 541 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms