RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 RFC4P35249 363 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 MC3RP41968 323 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 BLKP51451 505 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 CLCNKAP51800 687 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 INHBEP58166 350 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 UBE2HP62256 183 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 ADAM8P78325 824 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 SPIBQ01892 262 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 GAD2Q05329 585 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 DNASE1L3Q13609 305 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 EFTUD2Q15029 972 aaKnown RBP eCLIP3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 RPE65Q16518 533 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 USH1GQ495M9 461 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 NADK2Q4G0N4 442 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 CFAP221Q4G0U5 840 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 PREPLQ4J6C6 727 aaPredicted RBP3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 STRIP1Q5VSL9 837 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 ARHGAP17Q68EM7 881 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 SULT1C3Q6IMI6 304 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 CES3Q6UWW8 571 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 SLC39A5Q6ZMH5 540 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 ZNF551Q7Z340 670 aaPredicted RBP3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 PIGWQ7Z7B1 504 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 ADAMTSL2Q86TH1 951 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 HAPLN4Q86UW8 402 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 VASH2Q86V25 355 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 ZNF573Q86YE8 665 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 FOXP4Q8IVH2 680 aaPredicted RBP3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 SPNS2Q8IVW8 549 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 MCEMP1Q8IX19 187 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 C4orf19Q8IY42 314 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 ZNF679Q8IYX0 411 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 BBS5Q8N3I7 341 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 FBXO39Q8N4B4 442 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 DCLK2Q8N568 766 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 NIPA2Q8N8Q9 360 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 SCAIQ8N9R8 606 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 OR13C2Q8NGS9 318 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 OR14L1PQ8NHC6 308 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 C9orf43Q8TAL5 461 aaPredicted RBP3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 SHKBP1Q8TBC3 707 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 CPA5Q8WXQ8 436 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 ZCCHC14Q8WYQ9 949 aaKnown RBP3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 DTD2Q96FN9 168 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 AJUBAQ96IF1 538 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 SEPT5Q99719 369 aaPredicted RBP3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 CCT7Q99832 543 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 GORASP1Q9BQQ3 440 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 CCDC77Q9BR77 488 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 ZNF577Q9BSK1 485 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 ZSCAN5AQ9BUG6 496 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 C1QTNF5Q9BXJ0 243 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 S1PR5Q9H228 398 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 KCNK15Q9H427 330 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 PLEKHA4Q9H4M7 779 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 SRD5A3Q9H8P0 318 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 SFXN1Q9H9B4 322 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 RNPEPL1Q9HAU8 725 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 IL23AQ9NPF7 189 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 PPANQ9NQ55 473 aaKnown RBP3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 TRIM36Q9NQ86 728 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 OR6C3Q9NZP0 311 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 HSFX1Q9UBD0 423 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 DNPEPQ9ULA0 475 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 REXO2Q9Y3B8 237 aaKnown RBP3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 MAU2Q9Y6X3 613 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 U3KQV3 271 aa3.95□□□□□ -1.78
RNU4-60P-201ENST00000517239 GRXCR1A8MXD5 290 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 KIF2AO00139 706 aaPredicted RBP3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 TLR4O00206 839 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 POLR3GO15318 223 aaPredicted RBP3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 CLDN3O15551 220 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 GPRIN2O60269 458 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 IPO13O94829 963 aaKnown RBP3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 PLGP00747 810 aaPredicted RBP3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 SERPINC1P01008 464 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 HPXP02790 462 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 LCATP04180 440 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 HIST1H2ABP04908 130 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 HSPA8P11142 646 aaKnown RBP3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 G6PDP11413 515 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 IGFBP2P18065 325 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 LBPP18428 481 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 GNAT2P19087 354 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 FUT1P19526 365 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 HIST1H2ADP20671 130 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 GALP22466 123 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 ADRA1DP25100 572 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 TYK2P29597 1187 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 MCM5P33992 734 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 AGTR2P50052 363 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 OAZ1P54368 228 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 PRRX1P54821 245 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 SLC37A1P57057 533 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 EEFSECP57772 596 aaKnown RBP3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 RAC3P60763 192 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 SRP54P61011 504 aaKnown RBP3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 ADORA2A-AS1P86434 159 aa3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 SNTB2Q13425 540 aaKnown RBP3.94□□□□□ -1.78
RNU4-60P-201ENST00000517239 PDE7AQ13946 482 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms