RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 M0QYT0 321 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 PDXKO00764 312 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 PER2O15055 1255 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 HNRNPRO43390 633 aaKnown RBP-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 PRDM1O75626 825 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 STK10O94804 968 aaKnown RBP-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 POP4O95707 220 aaKnown RBP-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 IGHV4-59P01825 116 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 ACHEP22303 614 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 PRKACGP22612 351 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 AHRP35869 848 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 CAPGP40121 348 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 GPR12P47775 334 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 ILF2Q12905 390 aaKnown RBP-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 SAFBQ15424 915 aaKnown RBP eCLIP-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 TLDC1Q6P9B6 456 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 PAMR1Q6UXH9 720 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 KRT27Q7Z3Y8 459 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 RNF144BQ7Z419 303 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 PTAR1Q7Z6K3 402 aaPredicted RBP-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 SYVN1Q86TM6 617 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 NIM1KQ8IY84 436 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 EID3Q8N140 333 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 PRR18Q8N4B5 295 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 LINC00304Q8N9R0 145 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 OR4N2Q8NGD1 307 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 OLIG1Q8TAK6 271 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 TBC1D16Q8TBP0 767 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 ZNF564Q8TBZ8 553 aaPredicted RBP-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 ABHD5Q8WTS1 349 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 NPRL2Q8WTW4 380 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 PIGTQ969N2 578 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 AZIN2Q96A70 460 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 EIF3CQ99613 913 aaKnown RBP-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 CMKLR1Q99788 373 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 MAPKAP1Q9BPZ7 522 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 LZTS2Q9BRK4 669 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 CNGB3Q9NQW8 809 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 CYSLTR2Q9NS75 346 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 HCN3Q9P1Z3 774 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 CAPN11Q9UMQ6 739 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 ERVK-11Q9UQG0 969 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 PPP1R3CQ9UQK1 317 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 CYP3A7-CYP3A51PA0A087WV96 503 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 GXYLT2A0PJZ3 443 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 MSGN1A6NI15 193 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 ZNF878C9JN71 531 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 NKX2-8O15522 239 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 TXNP10599 105 aaKnown RBP-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 POLR2CP19387 275 aaPredicted RBP-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 CYP3A7P24462 503 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 EPHA2P29317 976 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 HDAC4P56524 1084 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 CSTF1Q05048 431 aaKnown RBP-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 ZNF543Q08ER8 600 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 EGFEM1PQ0D2K5 195 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 FAPQ12884 760 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 MTF1Q14872 753 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 P3H1Q32P28 736 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 TKFCQ3LXA3 575 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 LHFPL2Q6ZUX7 228 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 RNF175Q8N4F7 328 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 RASSF8Q8NHQ8 419 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 TDRD7Q8NHU6 1098 aaKnown RBP-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 SMCR8Q8TEV9 937 aaPredicted RBP-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 COG1Q8WTW3 980 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 PPM1EQ8WY54 764 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 TMEM143Q96AN5 459 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 CALML4Q96GE6 196 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 MTERF1Q99551 399 aaKnown RBP-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 IFT27Q9BW83 186 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 TDRD1Q9BXT4 1180 aaKnown RBP-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 SLC13A1Q9BZW2 595 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 FBXO28Q9NVF7 368 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 ANKRD10Q9NXR5 420 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 STK32BQ9NY57 414 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 MARCH4Q9P2E8 410 aaPredicted RBP-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 ABCG2Q9UNQ0 655 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 MAPRE3Q9UPY8 281 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 PSG11Q9UQ72 335 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 WDR37Q9Y2I8 494 aa-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 UBE2J1Q9Y385 318 aaPredicted RBP-1.02□□□□□ -2.57
RNU6-539P-201ENST00000516665 ARHGAP21Q5T5U3 1957 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 BAHCC1Q9P281 2608 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 A0A087X0B3 334 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 TRIM43BA6NCK2 446 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 PLK4O00444 970 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 MAGEC1O60732 1142 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 RGS11O94810 467 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 TOXO94900 526 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 LYPD3O95274 346 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 HLA-DQA2P01906 255 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 VIL1P09327 827 aaKnown RBP-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 KITP10721 976 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 CTPS1P17812 591 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 CELP19835 753 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 ERCC5P28715 1186 aaPredicted RBP-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 AMPHP49418 695 aa-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 ADKP55263 362 aaKnown RBP-1.03□□□□□ -2.57
RNU6-539P-201ENST00000516665 MEF2CQ06413 473 aaPredicted RBP-1.03□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms