RNA–Protein interactions for RNA: ENST00000516419.1

SNORA48.9-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 162 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.9-201ENST00000516419 LOXL2Q9Y4K0 774 aa6.33□□□□□ -1.4
SNORA48.9-201ENST00000516419 IGKV2D-30A0A075B6S6 120 aa6.32□□□□□ -1.4
SNORA48.9-201ENST00000516419 K7ENM7 598 aa6.32□□□□□ -1.4
SNORA48.9-201ENST00000516419 SLC28A2O43868 658 aa6.32□□□□□ -1.4
SNORA48.9-201ENST00000516419 KDM4BO94953 1096 aa6.32□□□□□ -1.4
SNORA48.9-201ENST00000516419 PAPSS2O95340 614 aaPredicted RBP6.32□□□□□ -1.4
SNORA48.9-201ENST00000516419 ACADLP28330 430 aa6.32□□□□□ -1.4
SNORA48.9-201ENST00000516419 CCKARP32238 428 aa6.32□□□□□ -1.4
SNORA48.9-201ENST00000516419 GRSF1Q12849 480 aaKnown RBP eCLIP6.32□□□□□ -1.4
SNORA48.9-201ENST00000516419 CHAF1BQ13112 559 aa6.32□□□□□ -1.4
SNORA48.9-201ENST00000516419 MAD2L1Q13257 205 aaPredicted RBP6.32□□□□□ -1.4
SNORA48.9-201ENST00000516419 IRF3Q14653 427 aa6.32□□□□□ -1.4
SNORA48.9-201ENST00000516419 RILPL1Q5EBL4 403 aa6.32□□□□□ -1.4
SNORA48.9-201ENST00000516419 RAB41Q5JT25 222 aa6.32□□□□□ -1.4
SNORA48.9-201ENST00000516419 NADSYN1Q6IA69 706 aa6.32□□□□□ -1.4
SNORA48.9-201ENST00000516419 ZNF280DQ6N043 979 aa6.32□□□□□ -1.4
SNORA48.9-201ENST00000516419 SDCCAG8Q86SQ7 713 aaPredicted RBP6.32□□□□□ -1.4
SNORA48.9-201ENST00000516419 NRROSQ86YC3 692 aa6.32□□□□□ -1.4
SNORA48.9-201ENST00000516419 OR2AK2Q8NG84 335 aa6.32□□□□□ -1.4
SNORA48.9-201ENST00000516419 MOAP1Q96BY2 351 aa6.32□□□□□ -1.4
SNORA48.9-201ENST00000516419 RHBDF1Q96CC6 855 aa6.32□□□□□ -1.4
SNORA48.9-201ENST00000516419 EGLN2Q96KS0 407 aa6.32□□□□□ -1.4
SNORA48.9-201ENST00000516419 PIGMQ9H3S5 423 aa6.32□□□□□ -1.4
SNORA48.9-201ENST00000516419 ZNF224Q9NZL3 707 aa6.32□□□□□ -1.4
SNORA48.9-201ENST00000516419 SIX4Q9UIU6 781 aa6.32□□□□□ -1.4
SNORA48.9-201ENST00000516419 MID1O15344 667 aa6.31□□□□□ -1.4
SNORA48.9-201ENST00000516419 OGG1O15527 345 aa6.31□□□□□ -1.4
SNORA48.9-201ENST00000516419 DDNO94850 711 aaPredicted RBP6.31□□□□□ -1.4
SNORA48.9-201ENST00000516419 PMS2P2O95744 297 aa6.31□□□□□ -1.4
SNORA48.9-201ENST00000516419 ICAM1P05362 532 aa6.31□□□□□ -1.4
SNORA48.9-201ENST00000516419 LINC00271P0C7V0 271 aa6.31□□□□□ -1.4
SNORA48.9-201ENST00000516419 CSH1P0DML2 217 aa6.31□□□□□ -1.4
SNORA48.9-201ENST00000516419 CSH2P0DML3 217 aa6.31□□□□□ -1.4
SNORA48.9-201ENST00000516419 ANXA7P20073 488 aaKnown RBP6.31□□□□□ -1.4
SNORA48.9-201ENST00000516419 ART1P52961 327 aa6.31□□□□□ -1.4
SNORA48.9-201ENST00000516419 TAS2R38P59533 333 aa6.31□□□□□ -1.4
SNORA48.9-201ENST00000516419 KEAP1Q14145 624 aa6.31□□□□□ -1.4
SNORA48.9-201ENST00000516419 KIF19Q2TAC6 998 aa6.31□□□□□ -1.4
SNORA48.9-201ENST00000516419 KCNT1Q5JUK3 1230 aa6.31□□□□□ -1.4
SNORA48.9-201ENST00000516419 TMTC2Q8N394 836 aa6.31□□□□□ -1.4
SNORA48.9-201ENST00000516419 OR1J2Q8NGS2 313 aa6.31□□□□□ -1.4
SNORA48.9-201ENST00000516419 ADGRG7Q96K78 797 aa6.31□□□□□ -1.4
SNORA48.9-201ENST00000516419 CMKLR1Q99788 373 aa6.31□□□□□ -1.4
SNORA48.9-201ENST00000516419 GAREM1Q9H706 876 aa6.31□□□□□ -1.4
SNORA48.9-201ENST00000516419 EPB41L5Q9HCM4 733 aa6.31□□□□□ -1.4
SNORA48.9-201ENST00000516419 STK39Q9UEW8 545 aa6.31□□□□□ -1.4
SNORA48.9-201ENST00000516419 NENFQ9UMX5 172 aa6.31□□□□□ -1.4
SNORA48.9-201ENST00000516419 CMAHPQ9Y471 501 aa6.31□□□□□ -1.4
SNORA48.9-201ENST00000516419 hCG_1807616A0A1W2PRN6 198 aa6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 H3BQ06 376 aaPredicted RBP6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 HS3ST1O14792 307 aa6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 TPPPO94811 219 aa6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 ZBTB11O95625 1053 aaPredicted RBP6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 PLA2G2AP14555 144 aa6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 PON1P27169 355 aa6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 APOBEC1P41238 236 aaKnown RBP6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 SREBF2Q12772 1141 aa6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 EPS8Q12929 822 aa6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 SNTA1Q13424 505 aa6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 SLC39A14Q15043 492 aa6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 SF3B4Q15427 424 aaKnown RBP eCLIP6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 RARS2Q5T160 578 aaKnown RBP6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 BRAT1Q6PJG6 821 aa6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 TMED8Q6PL24 325 aaPredicted RBP6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 RBM23Q86U06 439 aaKnown RBP6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 LILRB1Q8NHL6 650 aaPredicted RBP6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 HM13Q8TCT9 377 aa6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 BICD1Q96G01 975 aa6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 RSRC1Q96IZ7 334 aaKnown RBP6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 NUDCD1Q96RS6 583 aa6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 MTERF1Q99551 399 aaKnown RBP6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 SRSF8Q9BRL6 282 aaKnown RBP6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 SUCLA2Q9P2R7 463 aaPredicted RBP6.3□□□□□ -1.4
SNORA48.9-201ENST00000516419 EIF4E1BA6NMX2 242 aaKnown RBP6.29□□□□□ -1.4
SNORA48.9-201ENST00000516419 MAP2K7O14733 419 aa6.29□□□□□ -1.4
SNORA48.9-201ENST00000516419 KCNN4O15554 427 aa6.29□□□□□ -1.4
SNORA48.9-201ENST00000516419 PORP16435 677 aaPredicted RBP6.29□□□□□ -1.4
SNORA48.9-201ENST00000516419 UGT1A1P22309 533 aa6.29□□□□□ -1.4
SNORA48.9-201ENST00000516419 GPR143P51810 404 aa6.29□□□□□ -1.4
SNORA48.9-201ENST00000516419 BRWD1-AS2P59051 145 aa6.29□□□□□ -1.4
SNORA48.9-201ENST00000516419 PDE1BQ01064 536 aa6.29□□□□□ -1.4
SNORA48.9-201ENST00000516419 CDC16Q13042 620 aa6.29□□□□□ -1.4
SNORA48.9-201ENST00000516419 CLEC17AQ6ZS10 378 aa6.29□□□□□ -1.4
SNORA48.9-201ENST00000516419 EPHX4Q8IUS5 362 aa6.29□□□□□ -1.4
SNORA48.9-201ENST00000516419 ZNF34Q8IZ26 560 aa6.29□□□□□ -1.4
SNORA48.9-201ENST00000516419 C17orf53Q8N3J3 647 aaPredicted RBP6.29□□□□□ -1.4
SNORA48.9-201ENST00000516419 SPATA22Q8NHS9 363 aa6.29□□□□□ -1.4
SNORA48.9-201ENST00000516419 DNAAF4Q8WXU2 420 aa6.29□□□□□ -1.4
SNORA48.9-201ENST00000516419 CALML4Q96GE6 196 aa6.29□□□□□ -1.4
SNORA48.9-201ENST00000516419 TMEM19Q96HH6 336 aa6.29□□□□□ -1.4
SNORA48.9-201ENST00000516419 GAD1Q99259 594 aa6.29□□□□□ -1.4
SNORA48.9-201ENST00000516419 TMEM39BQ9GZU3 492 aa6.29□□□□□ -1.4
SNORA48.9-201ENST00000516419 C6orf106Q9H6K1 298 aaPredicted RBP6.29□□□□□ -1.4
SNORA48.9-201ENST00000516419 SWAP70Q9UH65 585 aa6.29□□□□□ -1.4
SNORA48.9-201ENST00000516419 AMDHD2Q9Y303 409 aa6.29□□□□□ -1.4
SNORA48.9-201ENST00000516419 MAGEA13PA6NCF6 341 aa6.28□□□□□ -1.4
SNORA48.9-201ENST00000516419 SMAD9O15198 467 aaKnown RBP6.28□□□□□ -1.4
SNORA48.9-201ENST00000516419 PPP1R3DO95685 299 aa6.28□□□□□ -1.4
SNORA48.9-201ENST00000516419 S1PR1P21453 382 aa6.28□□□□□ -1.4
SNORA48.9-201ENST00000516419 BDNFP23560 247 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms