RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 SCAIQ8N9R8 606 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 TOP1MTQ969P6 601 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 NODALQ96S42 347 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 HEPHQ9BQS7 1158 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 TMEM39AQ9NV64 488 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 TRMT6Q9UJA5 497 aaKnown RBP13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 UNCXA6NJT0 531 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 H0Y858 1186 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 PSMD11O00231 422 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 ASGR1P07306 291 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 IDO1P14902 403 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 ECT2LQ008S8 904 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 PRKG2Q13237 762 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 CTXN3Q4LDR2 81 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 MIB1Q86YT6 1006 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 ZNF540Q8NDQ6 660 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 DEFB118Q96PH6 123 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 FEM1AQ9BSK4 669 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 C3orf18Q9UK00 162 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 GUCA1CO95843 209 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 CCDC159P0C7I6 412 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 GRK4P32298 578 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 HOXD12P35452 270 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 INPP1P49441 399 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 CCDC85BQ15834 202 aaPredicted RBP13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 EFL1Q7Z2Z2 1120 aaKnown RBP13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 AKAP14Q86UN6 197 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 PIM3Q86V86 326 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 CMTR2Q8IYT2 770 aaKnown RBP13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 MCFD2Q8NI22 146 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 LPPQ93052 612 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 SLC45A3Q96JT2 553 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 RASSF1Q9NS23 344 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 ABCA3Q99758 1704 aa13.55□□□□□ -0.24
SH3TC1-225ENST00000515682 SLX4Q8IY92 1834 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 ZCWPW2A0A1B0GU75 182 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 YJEFN3A6XGL0 299 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 HOXA2O43364 376 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 DNAJB2P25686 324 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 MAGEA6P43360 314 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 PIWIL3Q7Z3Z3 882 aaKnown RBP13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 TMEM135Q86UB9 458 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 CARM1Q86X55 608 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 TRMOQ9BU70 441 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 CASS4Q9NQ75 786 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 TUBA8Q9NY65 449 aaPredicted RBP13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 FAM8A1Q9UBU6 413 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 TCAF1Q9Y4C2 921 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 SMIM35A0A1B0GVV1 85 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 TBKBP1A7MCY6 615 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 XYLBO75191 536 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 ANXA6P08133 673 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 DARSP14868 501 aaKnown RBP13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 S100A1P23297 94 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 RAB15P59190 212 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 UBE3AQ05086 875 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 MEP1AQ16819 746 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 LDLRAD1Q5T700 205 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 R3HCC1LQ7Z5L2 792 aaKnown RBP13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 SLC7A5P1Q8MH63 180 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 PACRGLQ8N7B6 248 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 ZNF420Q8TAQ5 688 aaPredicted RBP13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 S100ZQ8WXG8 99 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 YIPF2Q9BWQ6 316 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 MARCH7Q9H992 704 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 LATS2Q9NRM7 1088 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 CCM2LQ9NUG4 571 aaPredicted RBP13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 CNOT11Q9UKZ1 510 aaKnown RBP13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 TPRKBQ9Y3C4 175 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 PKP3Q9Y446 797 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 RBM47A0AV96 593 aaKnown RBP13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 HTR3EA5X5Y0 456 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 ZNF195O14628 629 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 TBX1O43435 398 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 CCL23P55773 120 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 OXCT1P55809 520 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 LAPTM5Q13571 262 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 KCNA10Q16322 511 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 C9orf57Q5W0N0 161 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 TFAP2CQ92754 450 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 SENP8Q96LD8 212 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 NPLQ9BXD5 320 aaPredicted RBP13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 DUSP16Q9BY84 665 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 PARVBQ9HBI1 364 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 ZFP14Q9HCL3 533 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 MTRRQ9UBK8 725 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 INVSQ9Y283 1065 aa13.54□□□□□ -0.24
SH3TC1-225ENST00000515682 NME4O00746 187 aa13.53□□□□□ -0.24
SH3TC1-225ENST00000515682 ACOT8O14734 319 aa13.53□□□□□ -0.24
SH3TC1-225ENST00000515682 AOC2O75106 756 aa13.53□□□□□ -0.24
SH3TC1-225ENST00000515682 ITGB6P18564 788 aa13.53□□□□□ -0.24
SH3TC1-225ENST00000515682 TIGD7Q6NT04 549 aaPredicted RBP13.53□□□□□ -0.24
SH3TC1-225ENST00000515682 Q6ZNX1 250 aa13.53□□□□□ -0.24
SH3TC1-225ENST00000515682 YME1L1Q96TA2 773 aa13.53□□□□□ -0.24
SH3TC1-225ENST00000515682 USE1Q9NZ43 259 aa13.53□□□□□ -0.24
SH3TC1-225ENST00000515682 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.53□□□□□ -0.24
SH3TC1-225ENST00000515682 CAB39Q9Y376 341 aaPredicted RBP13.53□□□□□ -0.24
SH3TC1-225ENST00000515682 CITO14578 2027 aa13.53□□□□□ -0.24
SH3TC1-225ENST00000515682 ALOX5P09917 674 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms