RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 IP6K2Q9UHH9 426 aa18.24■□□□□ 0.51
SPOP-220ENST00000515508 ANAPC7Q9UJX3 599 aa18.24■□□□□ 0.51
SPOP-220ENST00000515508 OAS3Q9Y6K5 1087 aaKnown RBP18.24■□□□□ 0.51
SPOP-220ENST00000515508 RELNP78509 3460 aa18.24■□□□□ 0.51
SPOP-220ENST00000515508 LRRK2Q5S007 2527 aa18.24■□□□□ 0.51
SPOP-220ENST00000515508 MATN3O15232 486 aa18.23■□□□□ 0.51
SPOP-220ENST00000515508 ATP1A1P05023 1023 aaKnown RBP18.23■□□□□ 0.51
SPOP-220ENST00000515508 CD48P09326 243 aa18.23■□□□□ 0.51
SPOP-220ENST00000515508 CCR10P46092 362 aa18.23■□□□□ 0.51
SPOP-220ENST00000515508 ZNF165P49910 485 aa18.23■□□□□ 0.51
SPOP-220ENST00000515508 ARSEP51690 589 aa18.23■□□□□ 0.51
SPOP-220ENST00000515508 EPHA4P54764 986 aa18.23■□□□□ 0.51
SPOP-220ENST00000515508 RPL26P61254 145 aaKnown RBP18.23■□□□□ 0.51
SPOP-220ENST00000515508 KRT81Q14533 505 aa18.23■□□□□ 0.51
SPOP-220ENST00000515508 HENMT1Q5T8I9 393 aaKnown RBP18.23■□□□□ 0.51
SPOP-220ENST00000515508 TIGD7Q6NT04 549 aaPredicted RBP18.23■□□□□ 0.51
SPOP-220ENST00000515508 IYDQ6PHW0 289 aa18.23■□□□□ 0.51
SPOP-220ENST00000515508 CEACAM20Q6UY09 585 aa18.23■□□□□ 0.51
SPOP-220ENST00000515508 NLGN4XQ8N0W4 816 aa18.23■□□□□ 0.51
SPOP-220ENST00000515508 NLGN4YQ8NFZ3 816 aaPredicted RBP18.23■□□□□ 0.51
SPOP-220ENST00000515508 ARRDC2Q8TBH0 407 aa18.23■□□□□ 0.51
SPOP-220ENST00000515508 BTBD6Q96KE9 485 aa18.23■□□□□ 0.51
SPOP-220ENST00000515508 WDR24Q96S15 920 aa18.23■□□□□ 0.51
SPOP-220ENST00000515508 ZPBPQ9BS86 351 aa18.23■□□□□ 0.51
SPOP-220ENST00000515508 HERPUD2Q9BSE4 406 aa18.23■□□□□ 0.51
SPOP-220ENST00000515508 THAP2Q9H0W7 228 aa18.23■□□□□ 0.51
SPOP-220ENST00000515508 STN1Q9H668 368 aaKnown RBP18.23■□□□□ 0.51
SPOP-220ENST00000515508 FBXO8Q9NRD0 319 aa18.23■□□□□ 0.51
SPOP-220ENST00000515508 TBC1D29Q9UFV1 150 aa18.23■□□□□ 0.51
SPOP-220ENST00000515508 ZNHIT2Q9UHR6 403 aa18.23■□□□□ 0.51
SPOP-220ENST00000515508 CNOT6Q9ULM6 557 aaKnown RBP18.23■□□□□ 0.51
SPOP-220ENST00000515508 RPL26L1Q9UNX3 145 aaKnown RBP18.23■□□□□ 0.51
SPOP-220ENST00000515508 CHKBQ9Y259 395 aa18.23■□□□□ 0.51
SPOP-220ENST00000515508 ZNF106Q9H2Y7 1883 aaKnown RBP18.22■□□□□ 0.51
SPOP-220ENST00000515508 TRBV23OR9-2A0A075B6M9 112 aa18.22■□□□□ 0.51
SPOP-220ENST00000515508 CLDN7O95471 211 aa18.22■□□□□ 0.51
SPOP-220ENST00000515508 ASMTLO95671 621 aa18.22■□□□□ 0.51
SPOP-220ENST00000515508 CA4P22748 312 aa18.22■□□□□ 0.51
SPOP-220ENST00000515508 CCNCP24863 283 aa18.22■□□□□ 0.51
SPOP-220ENST00000515508 MAP4P27816 1152 aaKnown RBP18.22■□□□□ 0.51
SPOP-220ENST00000515508 MAN1A1P33908 653 aa18.22■□□□□ 0.51
SPOP-220ENST00000515508 DPYSL3Q14195 570 aa18.22■□□□□ 0.51
SPOP-220ENST00000515508 TDRD12Q587J7 1177 aaKnown RBP18.22■□□□□ 0.51
SPOP-220ENST00000515508 CHST15Q7LFX5 561 aaPredicted RBP18.22■□□□□ 0.51
SPOP-220ENST00000515508 SH3KBP1Q96B97 665 aa18.22■□□□□ 0.51
SPOP-220ENST00000515508 NAP1L5Q96NT1 182 aaPredicted RBP18.22■□□□□ 0.51
SPOP-220ENST00000515508 TSGA13Q96PP4 275 aa18.22■□□□□ 0.51
SPOP-220ENST00000515508 NUP85Q9BW27 656 aa18.22■□□□□ 0.51
SPOP-220ENST00000515508 RMI1Q9H9A7 625 aa18.22■□□□□ 0.51
SPOP-220ENST00000515508 GPN2Q9H9Y4 310 aaPredicted RBP18.22■□□□□ 0.51
SPOP-220ENST00000515508 HAUS2Q9NVX0 235 aa18.22■□□□□ 0.51
SPOP-220ENST00000515508 PRKAB1Q9Y478 270 aa18.22■□□□□ 0.51
SPOP-220ENST00000515508 TMEM184BQ9Y519 407 aaPredicted RBP18.22■□□□□ 0.51
SPOP-220ENST00000515508 FADS2P1A8MWK0 482 aa18.21■□□□□ 0.51
SPOP-220ENST00000515508 MBD3O95983 291 aa18.21■□□□□ 0.51
SPOP-220ENST00000515508 CYP1A2P05177 515 aa18.21■□□□□ 0.51
SPOP-220ENST00000515508 F3P13726 295 aa18.21■□□□□ 0.51
SPOP-220ENST00000515508 SLC2A4P14672 509 aa18.21■□□□□ 0.51
SPOP-220ENST00000515508 SRSF1Q07955 248 aaKnown RBP eCLIP18.21■□□□□ 0.51
SPOP-220ENST00000515508 NFATC2Q13469 925 aa18.21■□□□□ 0.51
SPOP-220ENST00000515508 IFI16Q16666 785 aaKnown RBP18.21■□□□□ 0.51
SPOP-220ENST00000515508 SNAP47Q5SQN1 464 aa18.21■□□□□ 0.51
SPOP-220ENST00000515508 CCDC122Q5T0U0 273 aa18.21■□□□□ 0.51
SPOP-220ENST00000515508 KIAA1143Q96AT1 154 aaPredicted RBP18.21■□□□□ 0.51
SPOP-220ENST00000515508 CTRCQ99895 268 aa18.21■□□□□ 0.51
SPOP-220ENST00000515508 ZNF670Q9BS34 389 aa18.21■□□□□ 0.51
SPOP-220ENST00000515508 EFHD1Q9BUP0 239 aa18.21■□□□□ 0.51
SPOP-220ENST00000515508 EPN3Q9H201 632 aa18.21■□□□□ 0.51
SPOP-220ENST00000515508 EPB41L1Q9H4G0 881 aa18.21■□□□□ 0.51
SPOP-220ENST00000515508 PCDH9Q9HC56 1237 aa18.21■□□□□ 0.51
SPOP-220ENST00000515508 RBM22Q9NW64 420 aaKnown RBP eCLIP18.21■□□□□ 0.51
SPOP-220ENST00000515508 KCNK6Q9Y257 313 aa18.21■□□□□ 0.51
SPOP-220ENST00000515508 BZW2Q9Y6E2 419 aaKnown RBP18.21■□□□□ 0.51
SPOP-220ENST00000515508 DOPEY2Q9Y3R5 2298 aa18.21■□□□□ 0.51
SPOP-220ENST00000515508 MN1Q10571 1320 aaPredicted RBP18.21■□□□□ 0.51
SPOP-220ENST00000515508 KIR2DS5A0A0G2JLQ3 304 aa18.2■□□□□ 0.5
SPOP-220ENST00000515508 A0A0G2JNG1 304 aa18.2■□□□□ 0.5
SPOP-220ENST00000515508 C1orf232A0A0U1RR37 186 aa18.2■□□□□ 0.5
SPOP-220ENST00000515508 LOC101059948A0A1B0GTJ6 334 aa18.2■□□□□ 0.5
SPOP-220ENST00000515508 SMTNL1A8MU46 457 aa18.2■□□□□ 0.5
SPOP-220ENST00000515508 A8MU76 341 aa18.2■□□□□ 0.5
SPOP-220ENST00000515508 GOLGA6L22H0YM25 854 aa18.2■□□□□ 0.5
SPOP-220ENST00000515508 KIR2DS3K7RE56 304 aa18.2■□□□□ 0.5
SPOP-220ENST00000515508 DLGAP3O95886 979 aa18.2■□□□□ 0.5
SPOP-220ENST00000515508 HLA-DQB2P05538 268 aa18.2■□□□□ 0.5
SPOP-220ENST00000515508 ANKRD34CP0C6C1 535 aa18.2■□□□□ 0.5
SPOP-220ENST00000515508 ACP5P13686 325 aa18.2■□□□□ 0.5
SPOP-220ENST00000515508 SPINT3P49223 89 aa18.2■□□□□ 0.5
SPOP-220ENST00000515508 PPM1FP49593 454 aaPredicted RBP18.2■□□□□ 0.5
SPOP-220ENST00000515508 NIPAL4Q0D2K0 466 aa18.2■□□□□ 0.5
SPOP-220ENST00000515508 ABHD18Q0P651 414 aa18.2■□□□□ 0.5
SPOP-220ENST00000515508 CDC20Q12834 499 aa18.2■□□□□ 0.5
SPOP-220ENST00000515508 KIR2DS5Q14953 304 aa18.2■□□□□ 0.5
SPOP-220ENST00000515508 CRTC2Q53ET0 693 aaPredicted RBP18.2■□□□□ 0.5
SPOP-220ENST00000515508 COLEC12Q5KU26 742 aa18.2■□□□□ 0.5
SPOP-220ENST00000515508 LYSMD3Q7Z3D4 306 aa18.2■□□□□ 0.5
SPOP-220ENST00000515508 TIPARPQ7Z3E1 657 aaKnown RBP18.2■□□□□ 0.5
SPOP-220ENST00000515508 SLC9B2Q86UD5 537 aa18.2■□□□□ 0.5
SPOP-220ENST00000515508 PTRH1Q86Y79 214 aaKnown RBP18.2■□□□□ 0.5
SPOP-220ENST00000515508 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms